Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00542 ATGGTTTCTTCTTCTAGAGTACGTGATCGAACTGAGGATTTCAAAGATGCTGTGCGACTCACATCTCGCTCTTTAGGTTATGACGAGTCAAAATTGGCATCCATCTTGGCATCTTTTATAATTCATAAACCTCGCCGAGTCTCATCCTTCACCAATTCTGCACTACGAACGATTGAAAGCATTGGAGCATTAGAGCAGTTCATCTTGAAGCATAGGAAGGACTACGTCGATTTCCACCGAACTACGCAACAAGAAAGAGATAGCATTGAACATGAAGTTGGTGCTTTTATTAAAACTTGCCAACAGCAAATTGATATTCTGAAAAATAATATCAATAATGAAGAGAGCAACACAAAAGGCTGGCTTGGTGTTACAGTCGATAAGTCTAATGCTGACACCATTGCGCATAAACATGGAGTGGTCCTAATTTTGAGCGAGAAACTCCACTCTGTTACCGCACAGTTTGATCAGTTAAGGGCCATACGCTTCCAGGATGCTATTAACAAAGCACTACCAAGAAGAAAACTTAACCGCATTGCTAAAAATTCTGCAGAAACTCCGAAACCGTTTGACTCTGAGCACCTGAGACATGCGGATTCACACAATAAGCCCCTACGAGCACAGCAACAGCAGCTCCTAGATGATGAAACCCATGCCCTCCAGGTGGAGTTAACTAGTCTTCTAGATGCAGTTCAAGAAACTGAAACTAAGATGGTGGAAATGTCTGCATTGAATCACCTCATGTCCACACATGTTTTGCAACAATCTCAGCAGATAGAGGTTCTATATGAGCAGGCAGTTGAAGCAACGAAAAATGTTGAGCTTGGTAACAAGGAGCTTTCTCAAGCAATTCAACGGAATAGCAGTAGCAGAACGTTTCTTTTGCTTTTCCTATTTGTGTTAACCTTTTCCATCCTTTTTCTTGATTGGTATAGTTAA 939 0.4132 MVSSSRVRDRTEDFKDAVRLTSRSLGYDESKLASILASFIIHKPRRVSSFTNSALRTIESIGALEQFILKHRKDYVDFHRTTQQERDSIEHEVGAFIKTCQQQIDILKNNINNEESNTKGWLGVTVDKSNADTIAHKHGVVLILSEKLHSVTAQFDQLRAIRFQDAINKALPRRKLNRIAKNSAETPKPFDSEHLRHADSHNKPLRAQQQQLLDDETHALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQSQQIEVLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00542 312 SUPERFAMILY t-snare proteins 75 276 IPR010989 GO:0016020|GO:0016192
Pte4g00542 312 Coils Coil 97 117 - -
Pte4g00542 312 Gene3D - 215 309 - -
Pte4g00542 312 PANTHER SYNTAXIN-18 8 312 - -
Pte4g00542 312 FunFam Syntaxin-81 like 215 309 - -
Pte4g00542 312 Pfam SNARE-complex protein Syntaxin-18 N-terminus 9 89 IPR019529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00542 Pte-Chr4 35508268 35511138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00542 68 313 SNARE and Associated Proteins AT1G51740 74.089 2.68e-113 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00542 K08492 - qsa:O6P43_016722 473.396