Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00538 ATGGCAGCAGATTCTTCCCGTGAGGAGAATGTTTACATGGCCAAATTGGCTGAACAGGCTGAAAGGTATGAGGAAATGGTTGAGTTCATGGAGAAAGTTGCAAAAACTGTGGATGTTGAGGACTTGACCGTGGAGGAGAGGAATCTCCTTTCTGTGGCTTACAAGAATGTAATTGGAGCTAGGAGGGCTTCATGGAGGATCATTTCTTCCATTGAACAGAAGGAAGAGAGTAGGGGCAACGAGGATCATGTTGCCATTATCAAGGATTACAGGGGAAAGATTGAGTCTGAGCTCAGCAAGATCTGTGATGGGATCTTGGACCTCCTTGAATCGCATCTTATTCCATCTGCGTCATCTGCCGAGTCTAGAGTTTTTTACCTTAAGATGAAGGGTGACTACCATAGGTACCTGGCTGAGTTTAAGACTGGAGCTGAGAGAAAGGAGGCTGCTGAGAGTACTTTTGTGGCTTACAAATCTGCTCAGGACATTGCTTTGGTTGAATTGGCTGCAACCCACCCTATTAGGCTTGGTCTCGCACTAAACTTCTCAGTCTTCTATTATGAAATCCTTAACAAACCAGATCGCGCATGTAATCTTGCAAAGGAGGCCTTTGATGAGGCTATCTCTGAACTTGATACACTCGGAGAAGAGTCATACAAGGACAGTACATTGATCATGCAACTCCTTCGAGATAATTTGACCTTGTGGACTTCTGACATCACGGTCTGCCTCTTCTCTTTTCTTTGTTTTTCCCTCCTTCCTCTCACGCATGATTACATTTAG 783 0.447 MAADSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEDLTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRGKIESELSKICDGILDLLESHLIPSASSAESRVFYLKMKGDYHRYLAEFKTGAERKEAAESTFVAYKSAQDIALVELAATHPIRLGLALNFSVFYYEILNKPDRACNLAKEAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITVCLFSFLCFSLLPLTHDYI* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00538 260 Pfam 14-3-3 protein 13 237 IPR023410 -
Pte4g00538 260 PANTHER 14-3-3 PROTEIN 7 239 IPR000308 -
Pte4g00538 260 FunFam 14-3-3 protein epsilon 2 243 - -
Pte4g00538 260 Coils Coil 13 33 - -
Pte4g00538 260 SMART 1433_4 7 250 IPR023410 -
Pte4g00538 260 PRINTS 14-3-3 protein zeta signature 90 114 IPR000308 -
Pte4g00538 260 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Pte4g00538 260 PRINTS 14-3-3 protein zeta signature 210 239 IPR000308 -
Pte4g00538 260 PRINTS 14-3-3 protein zeta signature 121 143 IPR000308 -
Pte4g00538 260 PRINTS 14-3-3 protein zeta signature 183 209 IPR000308 -
Pte4g00538 260 PRINTS 14-3-3 protein zeta signature 41 70 IPR000308 -
Pte4g00538 260 ProSitePatterns 14-3-3 proteins signature 1. 47 57 IPR023409 -
Pte4g00538 260 PIRSF 14-3-3 1 242 IPR000308 -
Pte4g00538 260 SUPERFAMILY 14-3-3 protein 6 239 IPR036815 -
Pte4g00538 260 Gene3D - 1 242 IPR036815 -
Pte4g00538 260 ProSitePatterns 14-3-3 proteins signature 2. 219 238 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00538 Pte-Chr4 35333912 35339507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00538 5 243 14-3-3 family AT5G38480 90.795 2.64e-162 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00538 K06630 - csv:101222068 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00538 4 35333912 35339507 Pte4g00538 4 35333912 35339507 RCT