Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00534 ATGGCTGTTCCCTTTTTGCCCAATAATCATACCATTGGATCAACTCCTCAAACTGCTATTAATTTTGCAGTAAATGACAGTAAGCTGATCAATGGTAACGGAGACCATTTCGGTCTTTCCAATTTTCTAGGCAGGAAACCTGTCAAGAAAGACAGACACAGTAAGATTTGCACAGCTCAGGGTGTCAGAGACCGCAGGGTGAGATTGTCCATTGGCATCGCCCGCAAATTCTTTGATCTCCAAGACATGTTAGGGTTCGACAAAGCTAGCAAAACCCTTGAGTGGCTACTCAACAAGTCCAAGAAAGCAATCAAAGAACTTGCAAGAATAAAGCAAAGCTCAAGTTGGGGTGCAGCCAAATGTTTGTCTTCCTCTTCAGAATGTGAGGTGGTTTCAGGTATGAATGAAGGGGAAGACATACAAGGGGTCGGTATCTGCAGCAAGCCATTTATGCTGGGGGTTGAAAAAGACAGAAGGAAGTTGAGAAGGACACAGTCTGGAATAGCAAAAGAGTCAAGGGCAGAGGCAAGAGCAAGAGCAAGGGAAAGAACCAGAGACAAAATTTGTACTAAATTGCATGATTCTTCTACTTCTAGAAGATACTCTGCAGCCCCTCGTGTTGTCCACCACTCTAGGTCATTGATGAACACAGCTGAAATTAGTACTGAAAAGCCAACCAAGTTAGTTGCAGGAATTGAACATTATGACCTTAAACTATCAGATAATAGTCAAGTGCAAAGACAAAAAGCTCTGGAGGAACCTGTCGTAACTAAAAAGAAGCCAAAGCCATCTTTAATCTCAAGCTCACAGCAAAGCTTAATGGTTTCCAGGAATGAAAGATTGAACCACAACAATTTCAATTGCAACTCCTTGTTCCCCAATTTCATCACTCCCAATTGGGAAGTTAGTGGTGCCACTGCGAGTACAACCTCTTGTGACATCACTAATGTGAATCTATCCACAGAACTTCAAATGTTTGGAAAGCCATGGGATATCTATGATAGTCAACCGTTTGAACTAATATGTATGTCTACTAAATCTCCAAGGTAG 1050 0.42 MAVPFLPNNHTIGSTPQTAINFAVNDSKLINGNGDHFGLSNFLGRKPVKKDRHSKICTAQGVRDRRVRLSIGIARKFFDLQDMLGFDKASKTLEWLLNKSKKAIKELARIKQSSSWGAAKCLSSSSECEVVSGMNEGEDIQGVGICSKPFMLGVEKDRRKLRRTQSGIAKESRAEARARARERTRDKICTKLHDSSTSRRYSAAPRVVHHSRSLMNTAEISTEKPTKLVAGIEHYDLKLSDNSQVQRQKALEEPVVTKKKPKPSLISSSQQSLMVSRNERLNHNNFNCNSLFPNFITPNWEVSGATASTTSCDITNVNLSTELQMFGKPWDIYDSQPFELICMSTKSPR* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00534 349 ProSiteProfiles R domain profile. 170 187 IPR017888 -
Pte4g00534 349 MobiDBLite consensus disorder prediction 164 183 - -
Pte4g00534 349 Pfam TCP family transcription factor 48 190 IPR017887 -
Pte4g00534 349 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Pte4g00534 349 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 44 262 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00534 Pte-Chr4 35267031 35268248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00534 10 189 TCP Transcription Factor Family AT1G67260 42.268 9.85e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte4g00534 TCP 6.2e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00534 - - tcc:18602099 208.764