Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00517 ATGCGGATGAGTTGTAATGGATGTCGGGTACTGAGAAAAGGGTGTGGTGAGAATTGCAGTATTAGACCATGCTTGCAGTGGATCAAAAGCCCCGAGTCACAAGCCAATGCTACTGTATTTTTGGCTAAGTTTTATGGTCGTGCTGGACTCATGAACCTCATCGGCGCTGGACCTGAGAATCTTCGTCCAGCAATTTTTCGATCATTGCTTTACGAGGCATGCGGGAGGATAGTGAATCCCATATACGGGTCAGTCGGGTTGCTGTGGTCCGGTAGCTGGCAGGTATGCCAAGCAGCTGTAGAAGCTGTGCTGAAAGGTGCTCCGATTACTCCGATCACTTCTGAAGCCGCCGCAAACGGACATGGTCCGCCGTTGAAGGCCTACGACATCCGGCATGTTTCAAAGGATGAGAACTCGTCTGCATCCCATGAGAATAATCGAGTCAAGACCCGGCCTCGATTCAAGAGCTCCGGTACCAAGCTCAAACCCAGGAAAACGTCAACCGGTTTGGAAAATTGTAGCGAGAAGCCGACCGGACCAATCAACGATTGCACAGTGGAGGTAGTGAACCGGTCTAGCAGTCATGAGTCTTCACTGAGTCATCAATCGGAAGCAGCTAATGCAGTGGATGGAGAGAGCAAAGATAGTGAAAGCATAAGCATGATCTCTGAGGAAACCGCCGAAGCAGTTTTATTCAGAGCTGAGCCGGAGCCAACCGGAAAACCGATTGAACCAACTCATGAGAGTGAAATCGGTTTGGAACTGACATTGGGCTTGGAACCGGTATCACGTGCGCATCGCGTGATCCCTGTAAAGAAGCGCAGGATTATGAATATGGAGCCGGCGCGTTGTGACGGTGCAGCTGGTAATGATAACGGCGCCTGTAAAATGGAGTTGGGCTTTGAATACTCGGCTGAGTGA 921 0.5049 MRMSCNGCRVLRKGCGENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLIGAGPENLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQVCQAAVEAVLKGAPITPITSEAAANGHGPPLKAYDIRHVSKDENSSASHENNRVKTRPRFKSSGTKLKPRKTSTGLENCSEKPTGPINDCTVEVVNRSSSHESSLSHQSEAANAVDGESKDSESISMISEETAEAVLFRAEPEPTGKPIEPTHESEIGLELTLGLEPVSRAHRVIPVKKRRIMNMEPARCDGAAGNDNGACKMELGFEYSAE* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00517 306 MobiDBLite consensus disorder prediction 161 178 - -
Pte4g00517 306 MobiDBLite consensus disorder prediction 135 178 - -
Pte4g00517 306 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Pte4g00517 306 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 228 - -
Pte4g00517 306 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Pte4g00517 306 PIRSF AS2 1 290 IPR017414 -
Pte4g00517 306 MobiDBLite consensus disorder prediction 190 219 - -
Pte4g00517 306 MobiDBLite consensus disorder prediction 135 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00517 Pte-Chr4 35047805 35049356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00517 1 276 AS2 family AT3G02550 59.420 1.38e-105 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte4g00517 LOB 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00517 - - zju:107416542 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00517 4 35047805 35049356 Pte4g00517 4 35047805 35049356 RCT