Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00506 ATGAACGCATCGTCGTGCTCCAGTCATCTTGCTCGAACCAACAGGCCTGATACCATCGGAATATTCCAAATTTTTGGTTTACGCACTGCAAAAGGAGTCCTTCTACGTGGTCCACCTGGAACAGGAAAAACTTCCCTGGCTCGATTATGTGCCCAAGATGCTGGTGTCAAACTTTTCTGTGTAAATGGACCTGAGATTATAAGCCAATACTATGGTGAAAGTGAGCAAGCACTGAATGAAGTTTTTGATTCAGCAAGCCATACTGCTCCGTCCGTGGTTTTCATTGATGAGTTGGATGCCATTGCACCTGCAAAAAAGGATGGAGGTGAAGAGCTAACTCAGAGAATGGTTGCTACATTATTAAACTTGATGGATGGGATTGGTAGGACCGAAGGACTACTTGTTATCGCTGCTGTTCGGGGAAAGAGCACGGCTGCTTGGTGGGGTGGGGGGAGGTGA 459 0.4684 MNASSCSSHLARTNRPDTIGIFQIFGLRTAKGVLLRGPPGTGKTSLARLCAQDAGVKLFCVNGPEIISQYYGESEQALNEVFDSASHTAPSVVFIDELDAIAPAKKDGGEELTQRMVATLLNLMDGIGRTEGLLVIAAVRGKSTAAWWGGGR* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00506 152 SMART AAA_5 29 140 IPR003593 GO:0016887
Pte4g00506 152 Gene3D - 7 144 IPR027417 -
Pte4g00506 152 Pfam ATPase family associated with various cellular activities (AAA) 33 138 IPR003959 GO:0005524|GO:0016887
Pte4g00506 152 PANTHER AAA-FAMILY ATPASE 21 138 - -
Pte4g00506 152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 138 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00506 Pte-Chr4 34873054 34873723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00506 25 138 Calmodulin-binding Proteins AT3G56690 74.561 1.75e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00506 - - qlo:115952644 194.512