Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00493 ATGTACAACATCGAAGTTCACAGCAAACATCCATATATAAATAGGACACACTTTGCTGATTATGAAAAACATTCTTCGTTCAAGAATTCAATACAGGAAGCTTCAGAGACATATATAAAAATGGCAAAGCTGCATCTACTCCTACAGGCCTTCACGCTGCTCTTCAGCCTTCTAGCATCAAATGTTCTTGCAAGAGATCATGCAGGAGCGGGAATTGCAACCTTCTACACTGATCAATCTCGTCTTGCTTGTCCAGAGGCGGGAAACCACGGAGACTCTATTGCAGCTGTTAGTAGCACACTATGGAACCGTGGACATGTTTGTGGAAAGAAAATGACTGTCAAGTGCATAGGGCCAGTGCATAATGGGGACCCTAATCCTTGCGAAGGAAAGAACACTCTGACTGTGACTGTTCGCGACTTTTGTGAGAATTGTCGAGGACTCATTGACTTGACTGTTAAGGGCTTTAAGTCCATTGCAAAGGAAAGTGCAGGAGAGATTGTTGTAAGTTACCGATTCCTTTAA 525 0.4305 MYNIEVHSKHPYINRTHFADYEKHSSFKNSIQEASETYIKMAKLHLLLQAFTLLFSLLASNVLARDHAGAGIATFYTDQSRLACPEAGNHGDSIAAVSSTLWNRGHVCGKKMTVKCIGPVHNGDPNPCEGKNTLTVTVRDFCENCRGLIDLTVKGFKSIAKESAGEIVVSYRFL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00493 174 Pfam Lytic transglycolase 95 171 IPR009009 -
Pte4g00493 174 CDD DPBB_EG45-like 70 172 - -
Pte4g00493 174 SMART dpbb_1 94 171 IPR007112 -
Pte4g00493 174 SUPERFAMILY Barwin-like endoglucanases 67 173 IPR036908 -
Pte4g00493 174 Gene3D - 68 174 IPR036908 -
Pte4g00493 174 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 71 174 IPR007112 -
Pte4g00493 174 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 52 172 IPR044206 GO:0009627|GO:0048046
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00493 90 172 Expansin Gene Family AT2G40610 35.052 3.23e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00493 - - gab:108464981 95.1301