Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00480 ATGAAGGTTAGGCAGGTGATGAGAGGGGTAGCTGGGTTATGCTCAGCAGTGTACGGTGAACTGTTCTGGGGTGGTGGTGATTGGCGTAGGGGAGCCTTTGCTTTATGCCGAGTTGTCAAGAAAAATGAGCACATACAGAGGACAAGTGATTCACGTGTGGAATCAAAGGCCAAGAAAGTTGCAAGTAGTTCAAGTAACTGGGATTTCAACGCAATGCGAACCACAAATGAACCCCTAAGCATCACCAGCGACATTTCTTCTCAAGCAAGTTACGTGTACACTTACATCCGTTATTCAAGTCCCATTTCTTCTCCATACGAAGCGGCTCCACCAGCAGATGTCGAGCCAGCTGCAATGGAGTCCGATCCTGCACACTTCTGGGTCTCTCCTGATTTAATACTAGATTCTTCAAAGGAGTATCCACCAGTACAAGAAGCTGCATCTGCATACTTCCCAAAATATGATTTCTCAAACGCAATAGCACCGTGGCTGTCATATGAACAGCAGCCAGAAATTTCACCTGGTTCGTCATACTCAAATTTCACTGCAAATGGATTTCTCTGCAAATGGTGTGTCGTAACTTGTTTCTCTTCACTGTACAACTTTCAACAGTATCGCCACATTCAAGCACCTGGTTGGACATTGGGGTGGACTTGGATGAAAAAAGAAGTAATTTGGACCATGATGGGAGCAGCTAAGTCACTCGCGAAGTCTGGAACGATATACACGAAGCTTGGTGAAAACCAGAGTGACAGAGGCTCAGCGACAGAGTGGAGAGGGAGACGGGCTGAAACGTAA 798 0.4637 MKVRQVMRGVAGLCSAVYGELFWGGGDWRRGAFALCRVVKKNEHIQRTSDSRVESKAKKVASSSSNWDFNAMRTTNEPLSITSDISSQASYVYTYIRYSSPISSPYEAAPPADVEPAAMESDPAHFWVSPDLILDSSKEYPPVQEAASAYFPKYDFSNAIAPWLSYEQQPEISPGSSYSNFTANGFLCKWCVVTCFSSLYNFQQYRHIQAPGWTLGWTWMKKEVIWTMMGAAKSLAKSGTIYTKLGENQSDRGSATEWRGRRAET* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00480 265 PANTHER PROTEIN COBRA 194 232 IPR006918 GO:0010215|GO:0016020
Pte4g00480 265 Pfam COBRA-like protein 198 236 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00480 Pte-Chr4 33965754 33969229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00480 198 231 COBRA Gene Family AT3G29810 73.529 1.84e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00480 - - qsa:O6P43_033983 193.356