Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00455 ATGGTCATCTCCACTCCTCAAGATAAGCCCGTGATTGTCTTGAACTACACGGGTGAGGAAAAGAAGTTTGCTGCTGAGGAAATCGCTTCCATGGTTCTTATCAAGATCCGTGAGATTGCTGAGGCATATCTTGGATCAACTGTGAAGAATGCTGTTGTTACTGTTCCTGCATACTTCAATGACTCTCAACGTCAGGCTACGAAGGATGCTGGTGTTATAGCAGGTCTTAATGTGATGCGAATCATTAATGAACCCACCGCTGCTGCCATTGCTTATGGTCTTGACAAGAAGGCCACAAGCGTCGGTGAGAAGAATGTGTTGATCTTTCATCTGGGGGGTGGTACTTTTGACGTTTCCGTCCTCAACATTGAAGAGGGCATTTTCCAAGTCAGGGCCACAGCTGGTGATACTCATCTTAGAGGTGAGGACTTCGATAATAGAATGGTGAACCATTTTATTGATTCTTTTTTTGAGGGGATAGACTTCTATTCTACAATTACTCGTGCTAGGTTTGAGGAACTCAACGTGGACCTCTTTAAGAAGTGTATGAAATCCGTGGAGAAGTGCCTGAGAGATGCTAAGATGGACAAGAGCTCTATCGGTGATGTTGTGCTTGTTGGTGGTTCTATCAGAATTCCAAAGGTGCAGCAGCTGTTACAGAACTTCTTTAATGGAAAAGAGCTTTACAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGAGCTGCCGTTCAGGCTGGCATTTTAAGCGGTGAAGGTAATGAGAAAGTTCGGGACCTGTTCCTGTTGGATGTTACCCCTTTGTCTCTTGGCTTGGAAAGCGCTGGAGGGGTGATGACAGTCTTGATCCCAAGGAACACCACCGTCCACCAAACAAGAACAAAGGATAACAACTTGTTGGGTAAATTTGTCCTTGCCGGCATCCCTCCTGCTCCAAGGGGTATTCGTCAGATTGCTGCTTGCTTTGACATCGATCCAAGGGGTAAATTTGTCCTTTACCACCAACAGAATTATGCTTATTACATGAGGAACAATATGAAGGATGAGAAGATTGCCTCCAAGCTTGCAGCTGATGAAAAGAAGAAGATTGAAGATGCGACTGACCAGGCCATTCAATGGTTGGATTTGGATGGGAACCAGCTGGCGGAGGCTGCTCAGTATGAGGATAAGATGGAGGAGCTGGAATCCATCTGCAATCCCATCATCGCCAAGATATATCAGGTTGCTGGCATGGACGATGATATTGATGCCCCCTCCTTCTGGTTCCAGTGA 1272 0.4591 MVISTPQDKPVIVLNYTGEEKKFAAEEIASMVLIKIREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFHLGGGTFDVSVLNIEEGIFQVRATAGDTHLRGEDFDNRMVNHFIDSFFEGIDFYSTITRARFEELNVDLFKKCMKSVEKCLRDAKMDKSSIGDVVLVGGSIRIPKVQQLLQNFFNGKELYKSINPDEAVAYGAAVQAGILSGEGNEKVRDLFLLDVTPLSLGLESAGGVMTVLIPRNTTVHQTRTKDNNLLGKFVLAGIPPAPRGIRQIAACFDIDPRGKFVLYHQQNYAYYMRNNMKDEKIASKLAADEKKKIEDATDQAIQWLDLDGNQLAEAAQYEDKMEELESICNPIIAKIYQVAGMDDDIDAPSFWFQ* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00455 423 FunFam Endoplasmic reticulum chaperone BiP 13 108 - -
Pte4g00455 423 Gene3D - 233 247 - -
Pte4g00455 423 SUPERFAMILY Actin-like ATPase domain 103 251 IPR043129 -
Pte4g00455 423 Gene3D - 97 139 - -
Pte4g00455 423 Gene3D - 336 419 IPR029048 -
Pte4g00455 423 PANTHER HEAT SHOCK PROTEIN 70KDA 153 366 IPR013126 GO:0005524|GO:0140662
Pte4g00455 423 SUPERFAMILY Actin-like ATPase domain 7 96 IPR043129 -
Pte4g00455 423 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 254 292 IPR029047 -
Pte4g00455 423 Gene3D - 182 232 - -
Pte4g00455 423 Pfam Hsp70 protein 2 156 IPR013126 GO:0005524|GO:0140662
Pte4g00455 423 Pfam Hsp70 protein 292 329 IPR013126 GO:0005524|GO:0140662
Pte4g00455 423 Gene3D Actin; Chain A, domain 4 140 155 - -
Pte4g00455 423 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 255 334 IPR029047 -
Pte4g00455 423 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 293 335 IPR029047 -
Pte4g00455 423 Gene3D - 32 96 - -
Pte4g00455 423 PRINTS 70kDa heat shock protein signature 51 71 - -
Pte4g00455 423 PRINTS 70kDa heat shock protein signature 114 124 - -
Pte4g00455 423 Gene3D - 2 31 - -
Pte4g00455 423 Gene3D Actin; Chain A, domain 4 156 181 - -
Pte4g00455 423 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 336 412 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00455 Pte-Chr4 32320039 32321828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00455 2 414 Calmodulin-binding Proteins AT3G12580 61.967 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00455 K03283 - csv:101211905 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00455 4 32320039 32321828 Pte4g00455 4 32320039 32321828 RCT
Pte4g00455 4 32320039 32321828 Pte15g00390 15 2788767 2797049 RCT
Pte7g00645 7 23152677 23155565 Pte4g00455 4 32320039 32321828 RCT
Pte15g00390 15 2788767 2797049 Pte4g00455 4 32320039 32321828 RCT