Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00436 ATGTCTTTTCAGCATAAAAGCTTCTGGTTGCCGCGAGAACCTGGATGTGTGACAGATGAAAATATGGAGTATGAGAATTGTTCTCAAATCGAGTCAAAGCGTGGTCATCAGTGGTTCGTGGATGGGGGTGAATCAGGAATGTTAAACAACAAAAAGAAGCAAGCTATAGAAGCTGTTAATGGAAGGCCAGTTTCTGGAGTTCCACATCTGAATGGTGTTCCATGGGATGCTACTTCTGGATTACAGTCAGTTCCTGGACTATTTGCTGACCGTCTTTTTGGGTCTGAGGATGTAAGGACTGCTAATCTAATAGATAGGAACATCCCATCAACTGGGAGTGAAAATCTGAACATTGGGAGAAAGGATTTTGAGAATCAATATGAAAATGATTCACCAATGGGTTTGTCAATGTCACATACCTTTGAGGACCCAACATCTTGCCTCAATTTTGGAGGTATCAGAAAAGTTAAAGTTAACCAGGTTAGGGATTCGGACAAGGGTGTGCCTGTGTCTATGGGACATTCTTACAGTGGGACGGACAACAGTATAATCTCAGTCGGGGCTTGTTATGACAAGGGTGGTGAAAGCATCATCTCTTTAAACCCAAGTTTTAACAATACCAACGAGAATATCATGGCAATGGGTACTCCCTTCAGTAAGGAAGATGAGAATCTCGCTTCTCTAGGTCCCACTTTCAGCAAAGGAGATGGGAGCTTCATGTTGATGGGCCATAATTATGGGAAGGGAGAGGATGGTTTGTTGTCAATGGGGCAGTCTTTTCAAAAGTTAGATGGGAAGTTCATATCCATGGGTCAGACATATGGAAAGGAAGACAGTAATGTTGTATCATTAGGGACATCCTACAACAAAGGTCCCGATAATTTTACTTTAATGGGTACATCCTACGGTAAAGACGGGGGAAGTTTAATTACTATTGGATCTTGCTATGAAAAGGGAAATAGTGATCACATCATGTCTCTGAATTCAACCAGCAATGATTCATGTCCTTCCTATGCTAAAGAAGATTCCAGCTCTCTCCCAGTGGGGCTTAGGTACAATAAAGGTGATAGCTGTACCATAAGTTTTGGTACTTTTCATGATGAATCTGAGGCAGATTTGTCTGGTGGGATCATCAGCAGCTATGATTTATTGCTGACTGGTCCAAGTTCTACCCAAGCTCCACAAGACCTAAAAGAATCAACAGAGTCAAATGGTGAAGCAAATGTAAATAGCATGTCAAAAGAAAATGCTCAATCTGATTCCATTCCTAAGAATAAAGAACCAAAGGCAACCAAGAAAGTGTCTCCTAGTCCTAACACATTCCCTTCGAATGTCAAAAGTTTATTATCAACTGGTATCTTTGATGGAGTTCCTGTGAAGTATGTATCATGGTCGCGGGAGAAAAATCTGGAAGGGGTTATAAAAGGAACAGGCTACTTATGTTCATGTGATAACTGCGGGAATTCAAAGGCTCTGAACGCCTATGAGTTTGAACGTCATGCTGGTGCAAAGACAAAGCACCCAAACAATCACATATACTTTGAGAACGGAAAAACTATATATGCTGTTGTTCAAGAGCTGAAGAACACTCCTCAAGAGATGCTTTTTGACGTAATTCAAACTGTGACAGGGTCACCCATCAACCAGAAGAATTTCCGTGTCTGGAAAGCATCCTTTCAAGCTGCTACCCGAGAACTTCAGCGAATCTATGGCAAGGATGAAGTTGCCAAGCATTCTTGA 1740 0.4161 MSFQHKSFWLPREPGCVTDENMEYENCSQIESKRGHQWFVDGGESGMLNNKKKQAIEAVNGRPVSGVPHLNGVPWDATSGLQSVPGLFADRLFGSEDVRTANLIDRNIPSTGSENLNIGRKDFENQYENDSPMGLSMSHTFEDPTSCLNFGGIRKVKVNQVRDSDKGVPVSMGHSYSGTDNSIISVGACYDKGGESIISLNPSFNNTNENIMAMGTPFSKEDENLASLGPTFSKGDGSFMLMGHNYGKGEDGLLSMGQSFQKLDGKFISMGQTYGKEDSNVVSLGTSYNKGPDNFTLMGTSYGKDGGSLITIGSCYEKGNSDHIMSLNSTSNDSCPSYAKEDSSSLPVGLRYNKGDSCTISFGTFHDESEADLSGGIISSYDLLLTGPSSTQAPQDLKESTESNGEANVNSMSKENAQSDSIPKNKEPKATKKVSPSPNTFPSNVKSLLSTGIFDGVPVKYVSWSREKNLEGVIKGTGYLCSCDNCGNSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDVIQTVTGSPINQKNFRVWKASFQAATRELQRIYGKDEVAKHS* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00436 579 MobiDBLite consensus disorder prediction 389 440 - -
Pte4g00436 579 MobiDBLite consensus disorder prediction 389 419 - -
Pte4g00436 579 Pfam Tify domain binding domain 472 527 IPR032308 -
Pte4g00436 579 PANTHER AUTOIMMUNE REGULATOR 8 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00436 Pte-Chr4 31125389 31132347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00436 357 560 PHD Transcription Factor Family AT3G53680 39.819 1.42e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00436 - - pcin:129292723 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00436 4 31125389 31132347 Pte4g00436 4 31125389 31132347 RCT
Pte18g01692 18 28327849 28331349 Pte4g00436 4 31125389 31132347 RCT