Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00432 ATGAAGAGAGGAAGAGAAATTGATACAGCCAACTATTTGATGTTCCCCTCTCAAGCAACCAAAGCTGAATCCCTGATCTCATCTCATGATTCTGATACTGGACGTGTCTTTCAGTGCATGACATGTAACAAGCAGTTCCCTTCGTTTCAAGCACTTGGTGGACACAGGGCAAGCCACAAGAAACCAAAGTCAATGGATGGAAAAGTTGAGACGAGCAAGACGAATGAATCGCCAACCAAAGCAAAGAGTCATGAGTGCTCCATCTGTGGTTTGGAGTTTGCAATTGGTCAGGCTTTAGGTGGTCATATGAGGAGACACAGAGGTGCAGCTTTGAATGATCATGAACATGCACAAGAAGATTCCACTCTTGGCAGTTCTGCGCCAGCAGCTGTGCGGAAGAATATGAGCACTAAGAGAATTTGGCTAGATTTGACTTTGATGCCTTTGGAGAATGATTTAGAGTTTCTGAAGCTTGGAAAGGTAGCACATTCTGCACCTTTGGTACATTGCTTCTTTTGA 519 0.4412 MKRGREIDTANYLMFPSQATKAESLISSHDSDTGRVFQCMTCNKQFPSFQALGGHRASHKKPKSMDGKVETSKTNESPTKAKSHECSICGLEFAIGQALGGHMRRHRGAALNDHEHAQEDSTLGSSAPAAVRKNMSTKRIWLDLTLMPLENDLEFLKLGKVAHSAPLVHCFF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00432 172 PANTHER ZINC FINGER PROTEIN ZAT5 18 151 - -
Pte4g00432 172 Gene3D Classic Zinc Finger 35 106 - -
Pte4g00432 172 SMART c2h2final6 37 59 IPR013087 -
Pte4g00432 172 SMART c2h2final6 84 106 IPR013087 -
Pte4g00432 172 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Pte4g00432 172 MobiDBLite consensus disorder prediction 52 81 - -
Pte4g00432 172 MobiDBLite consensus disorder prediction 59 80 - -
Pte4g00432 172 Pfam C2H2-type zinc finger 84 108 - -
Pte4g00432 172 Pfam C2H2-type zinc finger 36 62 - -
Pte4g00432 172 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Pte4g00432 172 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Pte4g00432 172 SUPERFAMILY beta-beta-alpha zinc fingers 35 106 IPR036236 -
Pte4g00432 172 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00432 Pte-Chr4 30711029 30711966 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00432 1 160 C2H2 Transcription Factor Family AT2G28710 45.122 4.49e-34 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte4g00432 zf-C2H2_6 1.8e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00432 - - gmx:100781134 180.259