Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00423 ATGAATGTTGGTAGCTCTAATAAATTCCTATTCGGGCTTCCAACTGTATTCTGCTTCATATATGTGTCATTAGCATTTCATCCTGATGACAACTTTCTAATAAACTGTGGATCCTCCAACAGTATGAAAGTCGGTGATCGAATATTTGTTGCTGACAATTCCAGTTCCTACACACTTTCAACCCAGAAGTCTATTTTGGCAAGCACAAATAAATCTACCTTATCACCGTCAAATTCTGGACTGCATAATACAGCGAGAGTTCTCACAAGTGTTTCCCGTTACACTTTTGCCATAAAGAAACATGGGAGACACTGGATCCGTTTGCATTTCTTTCCCTTCATACATAATAACTATAATATGAGTTCTGCAAGATTCTCAGTTTCTGCTGAGAACTTCACTCTTCTCAAAGACTTCAATACAGATAGTGGTCCTGTTCTTAAAGAATACTCTCTCAATATAACTTCTGATAAGCTTGTGCTGACTTTCTCCCCCTCTTCCCGTTCCTTCGCATTCATAAACTCCATTGAAGTTTTCTCCCTTCCTGATGAGCTCGTTCCTGAGCATGTTTCAATTAATTCCGAAAGTGATCAACGTTATTTGGGGATGCAGGCGTTGGAGACTGTGGCAAGAGTCAACATGGGGAATGTTACAGTATCTCCAGAAGATGATACGCTATGGCGCTCATGGGACTCCGATGATGATGGTTATCTGAGACACAGTAATCTCGTAGAATTTGAAAAAAATGTTTCAGTTGTTAATTTCGGAAAAGGAACAGGACCTACTGAGAATATTGCCCCAGCTTCTGTATATGGCACAGCGACTAGGTTAAAGTCAGAATATGAACCCAGAACGAGTGCCAACGTGACGTGGAACTTCGATGTGGATCCTGATTTTGGCTACCTTGTTCGCTTTCATTTCTGTGAAGTACTTAGGAATCTTTCAACAGGCCCTCCACTTTTCAATGTTTATGTCAACTCCCGGCTAGTATCAAGAGTTGACTTACGCAAGCTAACATCAAATACCGTAGGTGCTCCGCACTATATAGATGCCATAACGACGGTAATCGGTAGTTCTAAACTGAATGTGAGTGTTGGTACTTCTGATTTTGCTCAAACTGATTACCCGACTGCCTTACTCAATGGATTGGAGATAATGAAAATAAGCGATTCTAAGAACAGCCTAGTCTTGGATTTGAGCACCAAGAAGAAAAATGGAGTCACAGTGGGGTCGGTGACTGCAGCGGCGGTTGTTGCTGTGATTCTGGCTATTGTTTCCTTCCTACTTTGCAGAAGAAGAAAAGGCGCACATGTTGGGCATACCAATGAAGAAGATCGTATTGCGACAAATGAAATGGACAACAGGTATACTAACAACGTGACTCACATCTTTTCGAGCTCAAAGATTGGCTACCGTTTTCAACTTGTGGCGATTCGGGAGGCGACTGCTAATTTTAGTGATAGTCTTATCATTGGTGTTGGCGGATTTGGTAAGGTTTACAAAGGAGTTCTTAGAGATGAAACGGAGGTGGCAGTGAAGAGGGGAGTTGGCGATTCAAGCCAAGGCCTTGTGGAATTTAAAACTGAAATTGAGATGTTATCTCAGTTTCGACATCGTCATTTGGTGTCACTAATTGGATACTGCAACGAAAGGGATGAGAAGATTATAATTTATGAGTTCATGAAAAATGGCACTCTGAAAAACCATCTTTATGGATCAGACTTGCCCTGCTTAAGTTGGAGGAAGAGGCTGGACATATGCATTGGATCAGCCAGAGGACTTCACTATCTCCACACTGGCTCTACTAAGGCAATTATTCACCGTGACGTGAAATCAGCCAACATACTCCTTGATGAGAATTTCATGGCCAAAGTTGCTGATTTTGGACTTTCAAAGACTGGTCCTGAGATTGACAAGACACATGTCAGTACTGCGGTTAAGGGAAGCTTTGGTTATCTTGATCCAGAATACTTGGTAACACAGCAGCTGACAGAGAAATCAGATGTCTACTCGTTTGGGGTGGTGATGTTTGAAGTCCTATGTGGGAGGCCTGTGATGGATCCCTCACAACCAAGGGAGAAGGTAAATTTAAGTGAATGGGTGTTGAAACAAAAGCAACAAGGGCAGGTAGAAGACATAGTAGATGCTCGCCTTGAGGGTCAGATAAAACCACGTTCACTTCGAAAGTTTGTTGACATTGCTAACAAGTGCTTAGCAGAACGTGGAATGGATAGGCCTACAATGGGGGATGTGCTATGGAATTTGGAATCTGCTCTCCAACTGCAAGGTGCTGATGAGAGATCCCTCAGCAATATTACCGATGTATCATCACACATTCGCCATGACAACAGTACTTCAATGGTAAGCTTCACTTCTATGCAACACAGCCTAGGCAGTATGGGTGATCTTGCTGGTGTTTCGATGAGTAAGGTGTTTGCTCGAATGGTGCATGAGGATATGAGGTAG 2463 0.4251 MNVGSSNKFLFGLPTVFCFIYVSLAFHPDDNFLINCGSSNSMKVGDRIFVADNSSSYTLSTQKSILASTNKSTLSPSNSGLHNTARVLTSVSRYTFAIKKHGRHWIRLHFFPFIHNNYNMSSARFSVSAENFTLLKDFNTDSGPVLKEYSLNITSDKLVLTFSPSSRSFAFINSIEVFSLPDELVPEHVSINSESDQRYLGMQALETVARVNMGNVTVSPEDDTLWRSWDSDDDGYLRHSNLVEFEKNVSVVNFGKGTGPTENIAPASVYGTATRLKSEYEPRTSANVTWNFDVDPDFGYLVRFHFCEVLRNLSTGPPLFNVYVNSRLVSRVDLRKLTSNTVGAPHYIDAITTVIGSSKLNVSVGTSDFAQTDYPTALLNGLEIMKISDSKNSLVLDLSTKKKNGVTVGSVTAAAVVAVILAIVSFLLCRRRKGAHVGHTNEEDRIATNEMDNRYTNNVTHIFSSSKIGYRFQLVAIREATANFSDSLIIGVGGFGKVYKGVLRDETEVAVKRGVGDSSQGLVEFKTEIEMLSQFRHRHLVSLIGYCNERDEKIIIYEFMKNGTLKNHLYGSDLPCLSWRKRLDICIGSARGLHYLHTGSTKAIIHRDVKSANILLDENFMAKVADFGLSKTGPEIDKTHVSTAVKGSFGYLDPEYLVTQQLTEKSDVYSFGVVMFEVLCGRPVMDPSQPREKVNLSEWVLKQKQQGQVEDIVDARLEGQIKPRSLRKFVDIANKCLAERGMDRPTMGDVLWNLESALQLQGADERSLSNITDVSSHIRHDNSTSMVSFTSMQHSLGSMGDLAGVSMSKVFARMVHEDMR* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00423 820 CDD STKc_IRAK 490 755 - -
Pte4g00423 820 SMART serkin_6 484 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00423 820 FunFam Putative receptor-like protein kinase 203 388 - -
Pte4g00423 820 SUPERFAMILY Protein kinase-like (PK-like) 460 754 IPR011009 -
Pte4g00423 820 Gene3D Transferase(Phosphotransferase) domain 1 560 779 - -
Pte4g00423 820 Gene3D - 203 389 - -
Pte4g00423 820 Gene3D - 31 180 - -
Pte4g00423 820 Gene3D Phosphorylase Kinase; domain 1 444 559 - -
Pte4g00423 820 ProSiteProfiles Protein kinase domain profile. 484 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00423 820 FunFam Receptor-like protein kinase FERONIA 560 770 - -
Pte4g00423 820 Pfam Malectin-like domain 34 387 IPR024788 -
Pte4g00423 820 FunFam receptor-like protein kinase FERONIA 448 559 - -
Pte4g00423 820 FunFam Putative receptor-like protein kinase 31 181 - -
Pte4g00423 820 Pfam Protein tyrosine and serine/threonine kinase 490 751 IPR001245 GO:0004672|GO:0006468
Pte4g00423 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Pte4g00423 820 PANTHER OS07G0166700 PROTEIN 471 761 IPR045272 GO:0004714|GO:0006468
Pte4g00423 820 ProSitePatterns Protein kinases ATP-binding region signature. 490 512 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00423 Pte-Chr4 30008922 30012714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00423 13 821 Receptor kinase-like Gene Family AT3G46290 50.841 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pte4g00423 Malectin_like 4.2e-30 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00423 - - qsa:O6P43_009390 992.26