Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00418 ATGGAACTCAACGACCTCTCGCGCTCCTCCATTGTCGACGCATCGCCAACACTCGGGCAGCTCTTGAAGCGTGTCGGTGATGCACGAAAAGAGGCCACCGGTGACGGTAGCGAAACCCCCATGCACCACGTGCTTGAAGTGGCAGACGGAAGCCTCGACCCGCGTTCGCTTCCCTTTGTGCTCGCTTTCAACAATCTCACTTATAGTGTCAAGGTCCAAAGGAAACTGGTTTTTCCGGCGATGTTTCAACGTGGCAGGTACCGTCTTGGAGCATCCGCCACCATTGCTGAACCTGTCGCCGGAGAGAGCTTGTTTACGAGAACCAAAACCCTCCTCAATGATATCTCAGGTGAAGCCCATGACGGCGAGATTGTCGCGGTTCTTGGAGCCAGTGGGTCCGGAAAATCAACTCTGATCGATGCTTTGGCCAATAGAATCGCCAAAGGAAGCTTGAAAGGAACTGTTATCTTAAGTGGCGAGGTCCTGGAGTCGCGACTTTTGAAAGTGATTTCTGCTTATGTAATGCAGGATGACTTGTTGTTCCCTATGCTTACAGTCGAAGAAACACTCATGTTCGCTGCGGAGTTTAGATTGCCTCGTACGTTGTCCAAATCAAAGAAGAAAATGAGAGTGCAGGCTTTGATCGATCAACTAGGCCTTAGAAACGCTGCAAAAACTATCATCGGCGATGAAGGCCACCGTGGAGTCTCTGGTGGAGAGCGACGCCGTGTTTCCATCGGGATAGATATAAATCATGACCCCATCATTCTGTTCCTTGATGAGCCAACATCCGGACTTGACTCAACGAGTGCATTCATGGTGGTCAAAGTGTTGCAGAGAATTGCTCAAAGTGGAAGCATAGTAATCATGTCCGTGCACCAACCAAGTTACCGTATTCTGGGTCTTATTGACCGGTTAATCTTTCTGTCAAGAGGGCAAACAGTTTACAGTGGCTCACCGTCACAGCTTCCATTGTTTTTTGCTGAATTCGGACAACCCATACCCGAGAATGAGAACCGAACAGAGTTTGCTTTGGACTTGATACGTGAACTGGAAGGTTCACCTGGAGGAAATAAAAGCTTGGTGGAATTCAACAGAACGTGGCAAAGCATGAAGCAATCAAATTCAGGATACACGGGAGGAGCAAGATACGGTAGTGGTGGCCTGTCGTTGAAAGAAGCAATCAGTGCAAGTATATCTAGAGGGAAATGGGTTTCAGGTGCTACAAACAACAACACAAGCCCAAGTTCCATGGTGCTAATATTTGCCAACCCTTTCTGGATAGAAATGGCAGTACTTGCCAAAAGGTCTTTGTTGAACTCAACAAGAATGCCAGAGTTGTTTGGAATCAGATTGGGTACTGTTATGGTAACTGGATTTATCTTAGCCACGATGTTTTGGCAATTGGACAATTCTCCTAAAGGTGTGCAAGAAAGGTTAGGCTTCTTCGCATTTGCTATGTCTACTACATTCTACACCACTGCTGATGCTCTTCCAGTGTTTCTTCAAGAGCGGTATATCTTCATGAGAGAGACAGCTTACAATGCGTATAGGCGGTCCTCTTATCTCATCTCTCACGCAATTGTGGCATTGCCATCACTAGCTTTCTTGTCATTGGCCTTTGCAGCCATCACCTTCTTCGCAGTAGGGCTTGATGGTGGAATACAAGGATTCTTGTTCTACTTCTTGACCATTTTCGCTTCATTTTGGTCTGGGAATTCGTTTGTTACTTTCCTATCTGGAGTGGTAACCCATGTTATGTTGGGATACACAATTGTCGTGGCAATCTTGGCTTATTTCTTGCTCTTCAGTGGCTTCTACATCAATAGGGACAGAATTCCAGCATACTGGATTTGGTTTCACTACTTGTCGCTTGTCAAGTACCCATATGAAGCTGTGCTGCATAATGAGTTCAGCGACCCAACAAAATGCTTTGTAAGAGGAGTGCAGATTTTCGACAATACACCACTTGGGGCAGTACCCAATGCATTGAAGCTCAACTTGTTAGATAACATGAGTAAGACTTTAGGCATGAGAATCACAAGTTCGACGTGTTTGACAACTGGTACAGACATATTGCAACAACAAGGGGTGACTGATCTGAGCAAGTGGAGCTGTCTGTGGATTACAGTGGCTTGGGGTTTCTTGTTCAGAATCCTGTTTTACTTTTCTTTGTTGCTGGGGAGCAAGAACAAGAGGAGGTGA 2205 0.4626 MELNDLSRSSIVDASPTLGQLLKRVGDARKEATGDGSETPMHHVLEVADGSLDPRSLPFVLAFNNLTYSVKVQRKLVFPAMFQRGRYRLGASATIAEPVAGESLFTRTKTLLNDISGEAHDGEIVAVLGASGSGKSTLIDALANRIAKGSLKGTVILSGEVLESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKMRVQALIDQLGLRNAAKTIIGDEGHRGVSGGERRRVSIGIDINHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSVHQPSYRILGLIDRLIFLSRGQTVYSGSPSQLPLFFAEFGQPIPENENRTEFALDLIRELEGSPGGNKSLVEFNRTWQSMKQSNSGYTGGARYGSGGLSLKEAISASISRGKWVSGATNNNTSPSSMVLIFANPFWIEMAVLAKRSLLNSTRMPELFGIRLGTVMVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLISHAIVALPSLAFLSLAFAAITFFAVGLDGGIQGFLFYFLTIFASFWSGNSFVTFLSGVVTHVMLGYTIVVAILAYFLLFSGFYINRDRIPAYWIWFHYLSLVKYPYEAVLHNEFSDPTKCFVRGVQIFDNTPLGAVPNALKLNLLDNMSKTLGMRITSSTCLTTGTDILQQQGVTDLSKWSCLWITVAWGFLFRILFYFSLLLGSKNKRR* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00418 734 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 43 720 - -
Pte4g00418 734 Pfam ABC transporter 112 264 IPR003439 GO:0005524
Pte4g00418 734 Pfam ABC-2 type transporter 432 638 IPR013525 GO:0016020|GO:0140359
Pte4g00418 734 Gene3D - 102 325 IPR027417 -
Pte4g00418 734 SMART AAA_5 121 313 IPR003593 GO:0016887
Pte4g00418 734 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 94 336 IPR003439 GO:0005524
Pte4g00418 734 Pfam ABC-2 type transporter 293 349 IPR043926 GO:0140359
Pte4g00418 734 ProSitePatterns ABC transporters family signature. 236 250 IPR017871 GO:0005524|GO:0016887
Pte4g00418 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 323 IPR027417 -
Pte4g00418 734 FunFam ABC transporter G family member 6 101 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00418 Pte-Chr4 28906421 28909061 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00418 111 323 Calmodulin-binding Proteins AT2G36910 29.091 1.89e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00418 K05681 - qsa:O6P43_006042 1191.02