Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00410 ATGGACTCTGCAGACTCTGGTTTTGTGCCTCTATTTGTTTATGCAATATTTGGATCATCTCGTCAGCTTGCGGTTGGTCCAGTAGCACTAGTTTCCCTTCTAGTGTCTAATGTTCTGAGTGGTATAGTTGATCCATCAGACGAGTTATATAAGGAGCTCGCAGTATTATTGGCACTTATGGTTGGCTTTTTTGAATGCCTAATGGGACTCTTGAGACTTGGGTGGCTGATTAGATTTATAAGTCACTCGGTGATTTCTGGTTTTACTACTGCTTCGGCTATAGTGATTGCCTTGTCTCAAGCAAAGTATTTTTTGGGGTACGACGTTGCACGCAGTAGCGAAATTGTGCCATTGGTGAAGAGTATAATAGATGGAGCAGATAAGTTTTCATGGCCCCCTTTTGTGATGGGATCTACCATTCTAGTGATACTCCTGCTCATGAAACACCTTGGAAAGTCAAGAAAGCACTTGCGGGTCCTGAGAGCAGCAGGACCACTCACAGGAGTATTGTTGGGGACAACTATTGTGAAAATATTTCAACCCTCCTCTATTTCATTGGTAGGAGATATTCCTCAGGGACTTCCAGGATTTTCCATTCCTAAACTATTTGGGTTTGCAAAGTCTTTAACTCCTACTGCGCTTCTCATAACTGGTGTGGCCATATTGGAATCTGTGGGTATTGCCAAAACATTAGCTGCAAAGAATGGGTATGAGTTGGACTCGAACCAAGAGTTGTTTGGTCTCGGTGTATCAAATATTTTTGGTTCATGCTTTTCAGCATACCCTACAACAGGATCATTTTCGAGGTCAGCTGTAAATTATGAAAGTGGGGCAAAAACTGGATTGTCTGGTATTGTGGCAGGGATTATTATGGGTTGTGCTCTCATGTTCTTAACTCCATTATTTGAATACGTTCCTCAGTGTGCTCTTGCTGCCATTGTGATTTCTGCAGTGATTGGTTTGGTGGATTATGACGAGGCCATCTTCCTCTGGAATGTAGATAAGAAGGATTTTCTACTTTGGGCTATTACTAGCACAATCACTTTATTTTTGGGCATTGAGATTGGCGTCATCGTTGGGGTTTGTGCTTCTCTTGCTTTTGTCATCCACGAATCAGCTAATCCACATATTGCTGTTTTAGGGCGTCTCCCTGGCACAACTGTTTATAGGAACGTTAAACAATATCCTGAAGCATATACATACTATGGAATTGTAATCGTTCGAGTAGACGCCCCTATTTATTTTGCTAATATAAGTTACATTAAAGACAGGTTAAGGGAATATGAATTTGATGTAGATAGCTCCACGAGACGTGGACCCGAAGTCGAAAGAATTTATTTTGTGATTTTGGAGATGGCCCCTGTGACGTACATAGATTCCAGTGCTGTTCAAGCTTTAAAGGACTTGCATCAGGAGTACAAATTACGGGACATCCAGATTGCTATATCCAATCTCAACAGGGAGGTTCTGCTGACCTTGTCAAACTCTGGTGTCGTGGAACTTATTGGCAAAGAATGGTACTTTGTTCGAGTGCATGACGCTGTTCAAGTTTGTCTTCAGCATGTCCAGAGGTTGACAGAGACCTCTAGGCCTTCGGACTTTTCTATTTCTCAGTTGGAGTCAGGACTTCCAATTCCTGAGCATATGGATCCTCAACTGGAGCCACTGCTGTCATTAAAATCTTAA 1686 0.4217 MDSADSGFVPLFVYAIFGSSRQLAVGPVALVSLLVSNVLSGIVDPSDELYKELAVLLALMVGFFECLMGLLRLGWLIRFISHSVISGFTTASAIVIALSQAKYFLGYDVARSSEIVPLVKSIIDGADKFSWPPFVMGSTILVILLLMKHLGKSRKHLRVLRAAGPLTGVLLGTTIVKIFQPSSISLVGDIPQGLPGFSIPKLFGFAKSLTPTALLITGVAILESVGIAKTLAAKNGYELDSNQELFGLGVSNIFGSCFSAYPTTGSFSRSAVNYESGAKTGLSGIVAGIIMGCALMFLTPLFEYVPQCALAAIVISAVIGLVDYDEAIFLWNVDKKDFLLWAITSTITLFLGIEIGVIVGVCASLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYYGIVIVRVDAPIYFANISYIKDRLREYEFDVDSSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLHQEYKLRDIQIAISNLNREVLLTLSNSGVVELIGKEWYFVRVHDAVQVCLQHVQRLTETSRPSDFSISQLESGLPIPEHMDPQLEPLLSLKS* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00410 561 FunFam Sulfate transporter 31 374 521 - -
Pte4g00410 561 NCBIfam sulfate permease 6 514 IPR001902 GO:0016020|GO:0055085
Pte4g00410 561 Pfam Sulfate permease family 7 344 IPR011547 GO:0016020
Pte4g00410 561 PANTHER SULFATE TRANSPORTER 6 521 IPR001902 GO:0016020|GO:0055085
Pte4g00410 561 SUPERFAMILY SpoIIaa-like 396 518 IPR036513 -
Pte4g00410 561 Pfam STAS domain 395 514 IPR002645 -
Pte4g00410 561 ProSiteProfiles STAS domain profile. 394 518 IPR002645 -
Pte4g00410 561 CDD STAS_SulP_like_sulfate_transporter 395 511 - -
Pte4g00410 561 Gene3D STAS domain 374 522 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00410 Pte-Chr4 27822988 27839401 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00410 6 523 Inorganic Solute Cotransporters AT5G13550 78.764 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00410 K18059 - mnt:21408122 909.827