Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00408 ATGGTTCTGGAGGTTGCTGTTAAGGCCGCAACTGGTGCTCCTGATGTTGTCGGAGACTGTCCATTTTGTCAAAGAGTTCTTTTAACATTGGAGGAAAAGAAAGTTCCATACAAGCTTCACCTTATTAATCTCACCGACAAACAAAAATGGTTTACAGATGTGAACCCAGAAGGGAAGGTGCCTGTGGTGAAGTTTGATGACAAATGGGTGTCCGACTCTGATGTGATTGTGGGAATACTTGAGGAGAAATTCCCTGAACCCTCCCTCACTCCTCCACCTGAGTTTACTTCTGTTGGATCCAAGATATTTGGGGCTTTTGTGAGTTTTCTGAAAAGCAAGGATCCAAATGATGGAACAGAACAGACATTGCTTAATGAGTTGAAAGCCTTGGATGACCATCTTAAGGAACATGGTCCATATGTTGCTGGTGAGAAGGTTACTGCTGTTGATTTGAGTTTGGCACCAAAACTCTACCATCTTGATATCACCCTTAGCCATTTTAAGAAGTGGACCATCCCTGAGACTTTCTCTCATGTTCACAACTATAAGAAGTTGCTTTTCTCTCGGGAGTCATTCCAGAAAACAAAGCCTGTTGCTGAGGAACATGTTATTGCTGGATGGGCTCCAAAGGTCAATCCTTGA 642 0.4315 MVLEVAVKAATGAPDVVGDCPFCQRVLLTLEEKKVPYKLHLINLTDKQKWFTDVNPEGKVPVVKFDDKWVSDSDVIVGILEEKFPEPSLTPPPEFTSVGSKIFGAFVSFLKSKDPNDGTEQTLLNELKALDDHLKEHGPYVAGEKVTAVDLSLAPKLYHLDITLSHFKKWTIPETFSHVHNYKKLLFSRESFQKTKPVAEEHVIAGWAPKVNP* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00408 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 66 213 IPR010987 -
Pte4g00408 213 Pfam Glutathione S-transferase, C-terminal domain 120 182 - -
Pte4g00408 213 SFLD Glutathione Transferase (cytosolic) 19 184 IPR040079 -
Pte4g00408 213 CDD GST_N_family 20 77 - -
Pte4g00408 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 210 IPR044627 GO:0033355|GO:0045174|GO:0098869
Pte4g00408 213 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Pte4g00408 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Pte4g00408 213 SFLD Main (cytGST) 19 184 - -
Pte4g00408 213 Gene3D - 90 213 - -
Pte4g00408 213 Gene3D Glutaredoxin 1 89 - -
Pte4g00408 213 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 213 - -
Pte4g00408 213 SUPERFAMILY GST C-terminal domain-like 83 202 IPR036282 -
Pte4g00408 213 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Pte4g00408 213 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00408 Pte-Chr4 27573615 27577208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00408 1 214 Glutathione S-transferase Gene Family AT1G75270 69.767 4.45e-111 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00408 K21888 - mnt:21408127 367.466