Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00405 ATGCAGTCAACGCCGGTGACAATTCCTTCATCGACCCGCCCCATTAAGATCATCCCGCTATTACACCCGATACCTGCTCCAACTTCGTCTTATTCTTCGTCATCTTATCCAAAAGCATTGTTCTCAAAGTTGATGGTTAAACTTCGTCGAATGACTTGGATCGAATGGCTTGATGCTATCCTTCCTTGTTCGCGCTGGATTAGAACATATAAGTGGAGCGAGTATTTGCAGACCGACATCATGGCTGGTACCACCGTCGGCGTGATGCTTGTCCCTCAGGCAATGTCTTACGCAAAATTAGCAGGACTTCAACCGATATATGGACTCTACTCTGGTTTTGTGCCTCTATTTGTTTATGCAATATTTGGATCATCTCGTCAGCTTGCGGTTGGTCCAGTAGCACTAGTTTCCCTTCTAGTGTCTAATGTTCTGAGTGGTATAGTTGATCCATCAGACGAGTTATATAAGGAGCTCGCAGTATTATTGGCACTTATGGTTGGCTTTTTTGAATGCCTAATGGGACTCTTGAGACTTGGGTGGCTGATTAGATTTATAAGTCACTCGGTGATTTCTGGTTTTACTACTGCTTCGGCTATAGTGATTGCCTTGTCTCAAGCAAAGTATTTTTTGGGGTACGACGTTGCACGCAGTAGCGAAATTGTGCCATTGGTGAAGAGTATAATAGATGGAGCAGATAAGTTTTCATGGCCCCCTTTTGTGATGGGATCTACCATTCTAGTGATACTCCTGCTCATGAAACACCTTGTAAGGAAGTCAAGAAAGCACTTGCGGGTCCTGAGAGCAGCAGGACCACTCACAGGAGTATTTGTTGGGGACAACTATTGTGAAAATATTTCAACCCTCCTCTATTTCATTGGTGAGAATGGCATTTCTTCCTCCTACTTTAGTATGCTAATACTCACTGAGTTCAAAGTCCATGCTAATATTAAGGGAGTAGTAGCTCATGCCTGCCATCTGGAAAAATCTGCATCTGTAGGAGATATTCCTCAGGGACTTCCAGGATTTTCCATTCCTAAACTATTTGGGTTTGCAAAGTCTTTAACTCCTACTGCGCTTCTCATAACTGGTGTGGCCATATTGGAATCTGTGGGTATTGCCAAAACATTAGCTGCAAAGAATGGGTATGAGTTGGACTCGAACCAAGAGTTGTTTGGTCTCGGTGTATCAAATATTTTTGGTTCATGCTTTTCAGCATACCCTACAACAGGATCATTTTCGAGGTCAGCTGTAAATTATGAAAGTGGGGCAAAAACTGGATTGTCTGGTATTGTGGCAGGGATTATTATGGGTTGTGCTCTCATGTTCTTAACTCCATTATTTGAATACGTTCCTCAGTGTGCTCTTGCTGCCATTGTGATTTCTGCAGTGATTGGTTTGGTGGATTATGACGAGGCCATCTTCCTCTGGAATGTAGATAAGAAGGATTTTCTACTTTGGGCTATTACTAGCACAATCACTTTATTTTTGGGCATTGAGATTGGCGTCATCGTTGGGGTTTGTGCTTCTCTTGCTTTTGTCATCCACGAATCAGCTAATCCACATATTGCTGTTTTAGGGCGTCTCCCTGGCACAACTGTTTATAGGAACGTTAAACAATATCCTGAAGCATATACATACTATGGAATTGTAATCGTTCGAGTAGACGCCCCTATTTATTTTGCTAATATAAGTTACATTAAAGACAGGTTAAGGGAATATGAATTTGATGTAGATAGCTCCACGAGACGTGGACCCGAAGTCGAAAGAATTTATTTTGTGATTTTGGAGATGGCCCCTGTGACGTACATAGATTCCAGTGCTGTTCAAGCTTTAAAGGACTTGCATCAGGAGTACAAATTACGGGACATCCAGATTGCTATATCCAATCTCAACAGGGAGGTTCTGCTGACCTTGTCAAACTCTGGTGTCGTGGAACTTATTGGCAAAGAATGGTACTTTGTTCGAGTGCATGACGCTGTTCAAGTTTGTCTTCAGCATGTCCAGAGGTTGACAGAGACCTCTAGGCCTTCGGACTTTTCTATTTCTCAGTTGGAGTCAGGACTTCCAATTCCTGAGCATATGGATCCTCAACTGGAGCCACTGCTGTCATTAAAATCTTAA 2121 0.4267 MQSTPVTIPSSTRPIKIIPLLHPIPAPTSSYSSSSYPKALFSKLMVKLRRMTWIEWLDAILPCSRWIRTYKWSEYLQTDIMAGTTVGVMLVPQAMSYAKLAGLQPIYGLYSGFVPLFVYAIFGSSRQLAVGPVALVSLLVSNVLSGIVDPSDELYKELAVLLALMVGFFECLMGLLRLGWLIRFISHSVISGFTTASAIVIALSQAKYFLGYDVARSSEIVPLVKSIIDGADKFSWPPFVMGSTILVILLLMKHLVRKSRKHLRVLRAAGPLTGVFVGDNYCENISTLLYFIGENGISSSYFSMLILTEFKVHANIKGVVAHACHLEKSASVGDIPQGLPGFSIPKLFGFAKSLTPTALLITGVAILESVGIAKTLAAKNGYELDSNQELFGLGVSNIFGSCFSAYPTTGSFSRSAVNYESGAKTGLSGIVAGIIMGCALMFLTPLFEYVPQCALAAIVISAVIGLVDYDEAIFLWNVDKKDFLLWAITSTITLFLGIEIGVIVGVCASLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYYGIVIVRVDAPIYFANISYIKDRLREYEFDVDSSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLHQEYKLRDIQIAISNLNREVLLTLSNSGVVELIGKEWYFVRVHDAVQVCLQHVQRLTETSRPSDFSISQLESGLPIPEHMDPQLEPLLSLKS* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00405 706 Pfam Sulfate permease family 76 489 IPR011547 GO:0016020
Pte4g00405 706 SUPERFAMILY SpoIIaa-like 541 663 IPR036513 -
Pte4g00405 706 Gene3D STAS domain 519 667 IPR036513 -
Pte4g00405 706 FunFam Sulfate transporter 31 519 666 - -
Pte4g00405 706 ProSitePatterns SLC26A transporters signature. 105 126 IPR018045 GO:0008271|GO:0008272
Pte4g00405 706 NCBIfam sulfate permease 62 659 IPR001902 GO:0016020|GO:0055085
Pte4g00405 706 CDD STAS_SulP_like_sulfate_transporter 540 656 - -
Pte4g00405 706 ProSiteProfiles STAS domain profile. 539 663 IPR002645 -
Pte4g00405 706 Pfam STAS domain 540 659 IPR002645 -
Pte4g00405 706 PANTHER SULFATE TRANSPORTER 41 666 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00405 Pte-Chr4 27405568 27421461 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00405 9 668 Inorganic Solute Cotransporters AT5G13550 69.242 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00405 K18059 - qsa:O6P43_009374 1005.74