Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00386 ATGTCAGAAATTCGCGAGCCTCGCAAGAAATCTCGTATCTGGCTCGGTACTTTTGCGACAGCAGAAATGGCTGCAAGAGCGCATGATGTTGCTGCTCTGAGAATTAAAGGTAACTTTGCAGTTCTAAATTTTCCGGACATAGCTGAGTTGTTGCCAAGACCAGTTTCCTTAACCCCACGTGACATCCAAGCTGCTGCTGCAATGGTCACATTTGATCCAGTACAATCATCCTCCTCATCATCGTTGTCGTCTTTGTGGATCTCAGAAGCATCGGAGTCAGAAGGATTGGATGAAATTGTTGAGTTGCCAAATATAGAAGGCAGTCTTGACTCAGAAGATTCAGGAAATGAGTTCATCATGATGGACGACACAGGAGACTGGTGGGTGTATCCACCCATGGTGCTAGAGGACGACGCTGAATTGTGTTGTGATTTCTTTGAGCCGCTGTCAACAGTTCAAATAATCCAGGCAAACATGAAAGACAAGTTTGAGAGATTCATTATTACTAGATTCTAA 516 0.4419 MSEIREPRKKSRIWLGTFATAEMAARAHDVAALRIKGNFAVLNFPDIAELLPRPVSLTPRDIQAAAAMVTFDPVQSSSSSSLSSLWISEASESEGLDEIVELPNIEGSLDSEDSGNEFIMMDDTGDWWVYPPMVLEDDAELCCDFFEPLSTVQIIQANMKDKFERFIITRF* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00386 171 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 109 - -
Pte4g00386 171 Pfam AP2 domain 8 37 IPR001471 GO:0003700|GO:0006355
Pte4g00386 171 CDD AP2 2 46 IPR001471 GO:0003700|GO:0006355
Pte4g00386 171 ProSiteProfiles AP2/ERF domain profile. 1 45 IPR001471 GO:0003700|GO:0006355
Pte4g00386 171 SMART rav1_2 2 51 IPR001471 GO:0003700|GO:0006355
Pte4g00386 171 SUPERFAMILY DNA-binding domain 2 46 IPR016177 GO:0003677
Pte4g00386 171 Gene3D AP2/ERF domain 1 46 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00386 Pte-Chr4 25052945 25053460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00386 1 156 AP2-EREBP Transcription Factor Family AT3G16280 45.509 1.50e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte4g00386 AP2 1.1e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00386 K09286 - qsa:O6P43_027735 179.104