Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00378 ATGAAAAAGAGTTTCAGGTTTCGAATATCTCGAGTTATCTCATCGTTTCAGTGGCAATGGCAATGGCAATCGTGCCGTTCAAAGGACCCAAATACTCTTCCATTAAATCCTGTTCCTACTTCATCCACCTTCCCCCATCATCACCACAATATTGAAGATAGCACTCCGAATGGCATTCAGGCAAGAACCATTCAGACAAAACAGGCCATCATAAACCTCCGGAAGTTCTCAACACCTAAATCACTGCCACCCCACAAGCCTGACCCCTCTTCGCTTAAACGAAATATGTCGACGGCACCTTTCTCCACCCGTTGTGCTATCTCAGAAGAAGGAAGTTGCCCTGGTTTTCAGTGGCAACAAGAAGACAAATGGCACGTGCTCATGGCCCCCAAGGTCTACAACCACAGACGAAAGATATACACTTCTTCTGTAACTGCTGGTTCGTCTGATGCGGACGAAGACGTTGTTTTGACTGGTGCACCACATCCGGTGAAGCCAGCTTTTTCGGTACAGGGGAAGAAGAAGAAACGACAAGAGAAGAACAAGAAAAGGATAACGAGAGATCGGGTCAGCACTTCTTCAGTTGACAGTTGTGGATGCTTCAGCAGCCAAACAACTGAAGAGCACTTCAGAGACTTCCCAGAAGAAACAAAAACTCTAGTAACGTCCCCTGAGTTTATTTCAAGTGGAAGTTATCACAAGAGCAAGAGGACGAAGCTCAAGAAATCAAAGAAGAAAGTGAGCAAACATCGTCGAAGCTCTTCTATGGAGATGATGAGTCCCGAGTCGCCAGCGAGGCTTTCGGTGTTTCAGAGGTTTATACCTTGTAAGGTGGAGGGAAAAGTCAGGGAGAGCCTTGCGGTGGTGAAAACGTCAGAGGATCCATACGAAGACTTCAGGAGGTCAATGATGGAGATGATTCTGGAGAAGAACATGTTTGAGGACAAAGATTTGGAGCAGTTGTTACAGTGTTTCTTGTCTTTAAATTCTGGTCAACACCATGGAGTTATAATTCGAGCTTTCTCTGAGATTTGGAACGCTCTATTTGCCAGTAAAAGATAG 1062 0.4539 MKKSFRFRISRVISSFQWQWQWQSCRSKDPNTLPLNPVPTSSTFPHHHHNIEDSTPNGIQARTIQTKQAIINLRKFSTPKSLPPHKPDPSSLKRNMSTAPFSTRCAISEEGSCPGFQWQQEDKWHVLMAPKVYNHRRKIYTSSVTAGSSDADEDVVLTGAPHPVKPAFSVQGKKKKRQEKNKKRITRDRVSTSSVDSCGCFSSQTTEEHFRDFPEETKTLVTSPEFISSGSYHKSKRTKLKKSKKKVSKHRRSSSMEMMSPESPARLSVFQRFIPCKVEGKVRESLAVVKTSEDPYEDFRRSMMEMILEKNMFEDKDLEQLLQCFLSLNSGQHHGVIIRAFSEIWNALFASKR* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00378 353 ProSiteProfiles OVATE domain profile. 288 347 IPR006458 -
Pte4g00378 353 Pfam Transcriptional repressor, ovate 292 349 IPR006458 -
Pte4g00378 353 MobiDBLite consensus disorder prediction 160 190 - -
Pte4g00378 353 MobiDBLite consensus disorder prediction 77 96 - -
Pte4g00378 353 MobiDBLite consensus disorder prediction 229 262 - -
Pte4g00378 353 MobiDBLite consensus disorder prediction 169 183 - -
Pte4g00378 353 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 161 351 IPR038933 GO:0045892
Pte4g00378 353 MobiDBLite consensus disorder prediction 234 251 - -
Pte4g00378 353 NCBIfam uncharacterized plant-specific domain TIGR01568 287 349 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00378 Pte-Chr4 24998803 25000183 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte4g00378 Ovate 3.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00378 - - qsu:112005201 241.121