Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00328 ATGACAGAACCAAAGACAGTTGTCATCTCAAGGAAATTCATCAAACCTTCATCTGAAACTCCTTCAAACCTCAAAACCTTCAAGCTCTCTCTCTTAGATCAAATGACCCCAGACCTTCATTTCAATACTACTTTCTTCTACCACCCTCCCAAATCATCTGATTACATAATTGCTACTGTTCCCGATTCAGCCTTTGCAAAATCAAAACAGCTACAGAACTCACTGTCTCGCACACTTCGTCACTTCTACCCTTATGCAGGTCGTTTCCAAGATGATAGCACTGTTGATTGTAACGATGAAGGCATCTTCTTCATTGAAGCTCATTCTGAAATGTCTCTTACAAATATCCTACAAAGTCCTAACTTACGCATTGTAGACGAAGACTTTCTCCCTAGTATTGAGTCTGAAACAAATGAATCATTTCGAGGTCCGATGCTACTCATCAAGTTTATCGTATTCAGTTGTGGTGGTTGTGCCTTGAGCCTCTCTATTTCACATAAGATTGCTGACATGGTATCATTGGCAACTTTTATGCAAAACCTATGCCTTGAATGTCTTGGAATCACCAGCCAACTACTGCCTGATTTCCCAACCTCCCCTACTCTTCTTCCTGCAAGAGATATACCTAACGTCAAAACCAATGCGATCATATCACCAAAGAAGTTCGCTACTATAAGGCTTGGTTTTCATGCTTCGAGAATTGTAAAGCTCAAAGCCAAGATCTTTAGCGCCCTGAATAAAGATGGCAAAGAATTATTTCACCCATCAACAGTGGAGGTGGTGGAAGCTTTAATCTTCAAATGGATAGTGGCTGCATGCAAGTGTAAAACAGGTTTATTTAAGCCCTCAGTGTTGGCCCAAGCTGTAAACCTCCGAACCAGATTAAACCCACCACGGCCTCAAAGTGCTATGGGAAACTTGATGTGGATGTTTCCTATCATAGTGGAAACTGAGAGTGAGATGGAAATGGTTGAGCTGGTGAAAAAATTGAGGGCCATGAAAGATTCCCTCAAGGATAAGGTAGCAAAATTCAATAGTGAAGAAATTGATGGGGTCGTTCAACAATTTCTTAGAGATAGAGCGGAGCATGTGCAGGTTTTAGAACTATGCATTTTCTCTAGTTGGTGCAAATTTCCACTCTTAGAAATGGACTTGGGATGGGGGAAACCGGTTTGGGTGACTAGCATAGCAAAGAACCTAATGGCAAACACTGTTTACTTAATGGATACAAAGGAAGTTGGAGGTGTTGAAGCTTTGGTGCACTTGGGTGAAGAAGAAATGAACTCTTTTGGAGCCAATGAAGAACTTCTTTGTTATGCTGCCGTTAATCCCAGTGTAATTTGA 1344 0.4122 MTEPKTVVISRKFIKPSSETPSNLKTFKLSLLDQMTPDLHFNTTFFYHPPKSSDYIIATVPDSAFAKSKQLQNSLSRTLRHFYPYAGRFQDDSTVDCNDEGIFFIEAHSEMSLTNILQSPNLRIVDEDFLPSIESETNESFRGPMLLIKFIVFSCGGCALSLSISHKIADMVSLATFMQNLCLECLGITSQLLPDFPTSPTLLPARDIPNVKTNAIISPKKFATIRLGFHASRIVKLKAKIFSALNKDGKELFHPSTVEVVEALIFKWIVAACKCKTGLFKPSVLAQAVNLRTRLNPPRPQSAMGNLMWMFPIIVETESEMEMVELVKKLRAMKDSLKDKVAKFNSEEIDGVVQQFLRDRAEHVQVLELCIFSSWCKFPLLEMDLGWGKPVWVTSIAKNLMANTVYLMDTKEVGGVEALVHLGEEEMNSFGANEELLCYAAVNPSVI* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00328 447 Coils Coil 327 347 - -
Pte4g00328 447 Pfam Transferase family 8 436 - -
Pte4g00328 447 Gene3D - 5 213 IPR023213 -
Pte4g00328 447 Gene3D - 220 438 IPR023213 -
Pte4g00328 447 PANTHER F21J9.9 8 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00328 Pte-Chr4 17101158 17102501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00328 14 430 Monolignol Biosynthesis Gene Families AT5G48930 22.991 4.43e-21 93.2