Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00327 ATGGCATCAACGAAAACTGAGATCATGTCCATTACTACCATCAAGCCTTCCTCACCCACTCCACCTCACCTCCAAACCTTCAAACTCTCCCTTCTGGATCAGCTCTCCCCTGATGTGCATATCAACTTGACCTTCTTCTATCCTTATAGCAGTGATGCCTCTACTGATTCTGCTAGTGACCCTTACCATGATTACACTTGCGTTTTCTTTTCCAAGTCCAAGCTTCTCCAGAAATCCATTGCTGAAACTCTGAAAATCTTCTACCCTTTGGCTGGCAGACTACAAGATGACAGTACAATCACTTGCAATGATGAAGGAGTAGTCTTCACAGAGTCCAAAACCAATTATCGTCTCTCTGATATTTTGACATCTCCTGAATTTGACCTTATTTATAGTGAGTTTGTCTCAACGAACTATCATGATGCCATGCAAGTGTCTAATGGATCTTTGTTACTCTTCAATTTTATACTGTTTCGCTGTGGTGGGACTGCAGTGAGTGTTGCAGCAGCACACAAAGTATTTGACATGTCATCCCTGATGACTTTCTTCAAAAGTTTAAGTGCAGCTTGTTGTGGATCTGCGGAACCCATTGTCCCAGATTTTCACACTGCACAAGCTCTCTTACCATCAAGAGAGATGCCGAGGACTGCATCCTTTGGTAATGCACGCAAGTGTAGCACAAGAAGTTTCATATTCACTGCCTCCAAGATTGAAGAGCTGAAGAGTATTGCAGCAAGCAGTCTTAAGAAAGATGGATATGAATTTGGGTATCTTTCTCGCGTGACTGTTGTGATGGCCTTCCTTTGGCAATGCGCTGTGACCACTTTCATATCCCAAAGAGGCTTCTTCAGACCAACTGTCATGTTACAAGCAGCTAACCTCCGAAACCGAATTGGACAGCCATTGCCCTCCAACGCTATGGGGAACCTTTCATTCTTGTACGCTACAGACATAGTTGAAAAGGATAATGATGTTCAATGGAGTGAATTCCTGAAGAAGCTCTTGGAGTTGAAGGCTTCAATTGATGAAAAGGCTAAAAAGTTCAACACAGACGAAGTGATCCGAGTTATGACACGAGAAGCTAGAGAGTCTTTCAATAAGAAAGATGCCGTGAACACTTACATTGGATCAAGTTGGTGTAGATTCGAATTTTACGAAATTGATTTTGGGATGGGCAAGCCGGTTTGGGTAACAAGCATTGCTCCCGAACTCCTCACAAATTGTGTTAATTTGTTGGACACAAAGGAGGAGGGTGGAGTTGAAGCTTTGGTGTACATGGAGGAAGAAGAGATGAAAGCATTTCAATGCAACCAGGAACTACTAAACTTTGCTGTGCTGTGCTCAACAGGAATGATATCTAGGAAAGATTGA 1371 0.4282 MASTKTEIMSITTIKPSSPTPPHLQTFKLSLLDQLSPDVHINLTFFYPYSSDASTDSASDPYHDYTCVFFSKSKLLQKSIAETLKIFYPLAGRLQDDSTITCNDEGVVFTESKTNYRLSDILTSPEFDLIYSEFVSTNYHDAMQVSNGSLLLFNFILFRCGGTAVSVAAAHKVFDMSSLMTFFKSLSAACCGSAEPIVPDFHTAQALLPSREMPRTASFGNARKCSTRSFIFTASKIEELKSIAASSLKKDGYEFGYLSRVTVVMAFLWQCAVTTFISQRGFFRPTVMLQAANLRNRIGQPLPSNAMGNLSFLYATDIVEKDNDVQWSEFLKKLLELKASIDEKAKKFNTDEVIRVMTREARESFNKKDAVNTYIGSSWCRFEFYEIDFGMGKPVWVTSIAPELLTNCVNLLDTKEEGGVEALVYMEEEEMKAFQCNQELLNFAVLCSTGMISRKD* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00327 456 Pfam Transferase family 5 440 - -
Pte4g00327 456 PANTHER F21J9.9 7 444 - -
Pte4g00327 456 Gene3D - 222 444 IPR023213 -
Pte4g00327 456 Gene3D - 3 217 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00327 Pte-Chr4 17065231 17066806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00327 5 435 Monolignol Biosynthesis Gene Families AT5G48930 22.388 1.06e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00327 - - qsa:O6P43_014533 380.563