Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00321 ATGTTACATTTTGTCCCCGACATTGATGATGACCCTGATGGCCTCATTTGCCGGTGTCTCACTCTCTCAGATCTTCACCTCGCTTGTGGTTTCATCAACGGTGCTGTTCGACTCTTCGATCTAAACACACACGTCCACGTCAGAACCTACCGTCCTAGTGAGCGCAATCGTTTGGGACAGTTTGCTCGAGCGGTGTCAGGCATTGTTATTAGCAACTCTCGCCTTACATTTGCTACGCTGGACGGAGACATCTACGTGGCAATTATAAACGGGCCGGCCCAACCTCGTCAAGTCCGTTTAGGCGATATCGTTACCAATGGGGCATTAGTGGATTTCTCTGGGTGTGGACGGTGGTGGGTGGGCCTATACGCTGGAGTTCCTGGTCAGGCCTTCCATATTTGGGATGCCCATACGGAAGAGACCATTTTCGTAGGCGGGACATTGACTGATCCGGTATCGCTTTTGGGCTGGCATATGTTGACTGAGTTGACCGAGTTGACTGAGGTTGTAGGCCGAGTCCGAGTCACACGTGATTCAGCCGTGGCATGCACGAGACTCCGCCTCATATTGTTTAGCCCTAGGGAGCAAGGGCTGGTATTGGGTGAGGAAGAGTCTAGGAGAGGATTGATTGTACCCTCCTTAGACGTCAGCCACGACGCGTACATGGTGGTAGATTCACGGGGTTTGGCTAGAGTGCGCAGGTTGAACACGTTTGAGGAGATATGCAGGTTTATTATAAGAGGGTTCTCTACACAAGCACTTATGGGGTGCATGAATTTAGGGCATGCTCTAGTATGGACAGGTAGTGAGATGAGGGTATGGGAAGTTGAGCATGGTGAATATCTGTACAGCATGAGAGAGGCAGTTGGAGAAGTCAATGCCATGGTAGCAAACAATAGACATGTAGCAGCTTCGTGTAATGACACAACCATTCACCTGTGGGATTTTGGTGACAGAGGCTAG 963 0.5036 MLHFVPDIDDDPDGLICRCLTLSDLHLACGFINGAVRLFDLNTHVHVRTYRPSERNRLGQFARAVSGIVISNSRLTFATLDGDIYVAIINGPAQPRQVRLGDIVTNGALVDFSGCGRWWVGLYAGVPGQAFHIWDAHTEETIFVGGTLTDPVSLLGWHMLTELTELTEVVGRVRVTRDSAVACTRLRLILFSPREQGLVLGEEESRRGLIVPSLDVSHDAYMVVDSRGLARVRRLNTFEEICRFIIRGFSTQALMGCMNLGHALVWTGSEMRVWEVEHGEYLYSMREAVGEVNAMVANNRHVAASCNDTTIHLWDFGDRG* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00321 320 ProSitePatterns Trp-Asp (WD) repeats signature. 302 316 IPR019775 -
Pte4g00321 320 Gene3D - 11 320 IPR015943 GO:0005515
Pte4g00321 320 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 14 316 IPR011047 -
Pte4g00321 320 PANTHER WD40 REPEAT PROTEIN 12, 37 13 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00321 Pte-Chr4 16474260 16475222 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Pte4g00321 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00321 - - qsa:O6P43_020721 449.514