Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00315 ATGTTCTCTAAGAGTTCTTCTCTAGCCAAATTCATGGGCTGCTGCAGTTGCTTTGGATTCTCCAGAAAGCATGAGCGTCGTAGCGCGTCTCGTGATCACTTTAATAAGCACCACCCTGAAAAGCCCTTGTTGGGTGATGATACTAATGATGATATCTCATCATATAATAGCGAAAGTACTAACATCACTGATGGAGATGAAAGAGATGACTGTGAAGTCCCCTGCCATGCTAAACGTTCTGAGGAAATTTTGAAATTCAGAGAAGAGAATGGCATGATCTGTAGGCAATTTCCTGTCAAGGAAACCCATAAACTTGTTCGCTCAGAGGATGAAAATGGGAATAAAATGATAAATGAGTATGTTCGCGAATGTAAGATTGGAGCTGGCAGCTATGGGAAAGTGGTGTTGTACAAAAGCACGGTAGATGGAAATTACTATGCAATCAAGGCATTTCACAAGTCTCATCTGTTGAAGCTTCGAGTGGCACCATCTGAGACTGCTATGACTGATGTTCTTCGCGAGGTACGGATTATGAAAATGTTGGACCATCCTAATATAGTTAATCTCGTTGAGGTGATTGATGACCCAGAGTTGGACAACTTTTATATGGTGCTTGAATACGTCCAAGGCAAATGGGTCTGTGAAGGTTCAGGTCAAATAGCAGGTTTAGGAGAGGAAACTGCCAGAAAGTACCTGCGTGATATTATTTCAGGACTGACATATCTCCATGCTCATAGTATAGTGCATGGAGACATTAAACCAGATAATCTACTGATCACTCAACATGGCTCAGTGAAGATCGGGGATTTTAGTGTCAGCCAGGTTTTTGAGGATGGTGATGATGAGCTTCGTCGATCACCTGGGACTCCTGTATTTACAGCACCTGAGTGTATTTTAGGTGTTACATATCATGGCAAAGCTGCAGATACTTGGGCATTAGGGGTTACCTTGTACTGTATGATATTGGGACAATACCCATTTCTTGGCGACTCACTTCAGGATACTTACGACAAAATAGTAAGTAAACCATTAGAACTTCCGGATAACTTGAATCCACCGCTGAAAAACTTAATAGAGGGAATTCTTTGCAAAGACATTGCGCAGAGGATGAGTCTGAGTGATATCGCAGAACATCCTTGGGTTATTGGAGATGATGGTCCAATTCCTCAGTACTTGTGTTGGTGTGAGCGTAAGAAATTGGAAAGAGAAGAATCTAAGCAGACAAGTGCTGATAACATTTCTTAG 1245 0.4185 MFSKSSSLAKFMGCCSCFGFSRKHERRSASRDHFNKHHPEKPLLGDDTNDDISSYNSESTNITDGDERDDCEVPCHAKRSEEILKFREENGMICRQFPVKETHKLVRSEDENGNKMINEYVRECKIGAGSYGKVVLYKSTVDGNYYAIKAFHKSHLLKLRVAPSETAMTDVLREVRIMKMLDHPNIVNLVEVIDDPELDNFYMVLEYVQGKWVCEGSGQIAGLGEETARKYLRDIISGLTYLHAHSIVHGDIKPDNLLITQHGSVKIGDFSVSQVFEDGDDELRRSPGTPVFTAPECILGVTYHGKAADTWALGVTLYCMILGQYPFLGDSLQDTYDKIVSKPLELPDNLNPPLKNLIEGILCKDIAQRMSLSDIAEHPWVIGDDGPIPQYLCWCERKKLEREESKQTSADNIS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00315 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Pte4g00315 414 SUPERFAMILY Protein kinase-like (PK-like) 116 395 IPR011009 -
Pte4g00315 414 MobiDBLite consensus disorder prediction 31 47 - -
Pte4g00315 414 MobiDBLite consensus disorder prediction 31 67 - -
Pte4g00315 414 SMART serkin_6 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00315 414 ProSiteProfiles Protein kinase domain profile. 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00315 414 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 60 385 - -
Pte4g00315 414 CDD STKc_LKB1_CaMKK 126 381 - -
Pte4g00315 414 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Pte4g00315 414 FunFam Serine/threonine-protein kinase Ssp1 114 216 - -
Pte4g00315 414 FunFam Serine/threonine-protein kinase GRIK2 110 414 - -
Pte4g00315 414 Gene3D Transferase(Phosphotransferase) domain 1 110 413 - -
Pte4g00315 414 Pfam Protein kinase domain 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00315 Pte-Chr4 15976420 15989847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00315 126 387 CBL-interacting serine-threonine protein kinases AT5G10930 34.457 9.78e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Pte4g00315 Pkinase 3.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00315 K00908 - zju:107411351 615.15