Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00303 ATGAAGGCGATGGACGGTGGTGGGCAGGAAGGCGCAAAGAGGGCTAGGGAGAGGAGTACAGCGGCGGGAGGCAGCAAAGTGGGGCGTGGAAAATTAGGCATGCAGAAAGATTACTACTACGTCCTTGGAATAGAAAAGAAATGCAGTGGCGATGACATCAAGAGAGCTTATCACAATCTTGCGTTGAAGTGGCACCCGGACAAAAATCCGGACAACAAGGAAGCTGCCGAAGAGAGATTCAAAGAGATCTCCCAGGCATATGAGGTTCTACGAGATCCCGAGAAGAGAGAAGCTTATGATGAGGAGTGTTTGAAAGCGGATGCTCCTTCCCCAAGTGCGGGTGGATTTTCAGCTAGACACGTGACTTTTCTCGGGAGTGCAGATGGTGTAACTTCGCAAAGTAAAAGGATAGGCTTTTGGATCAAGGCGCTGCTAATTCCCTTGCAGCTTATGAAAATGGTGGACGTAGATTCCTCCATGACTTCTGAAGATTTATGTGAATTGGTGAACCGGACTGCCTGGGAATGGGTACTCATTAACCACCGCGAAGCAGTTATCGGCTCTCGTGGCGGTTTTGATTACCAACTAATGGACATATCGGGAGAAATTTTAAATCCAAATGAAATGCAACTGAGCAGAATCTTTCCCTTGCTTCACAAGATTGTCGCCTTTCCTGTTCATATCCCGAGATTTAAATATTGA 702 0.4715 MKAMDGGGQEGAKRARERSTAAGGSKVGRGKLGMQKDYYYVLGIEKKCSGDDIKRAYHNLALKWHPDKNPDNKEAAEERFKEISQAYEVLRDPEKREAYDEECLKADAPSPSAGGFSARHVTFLGSADGVTSQSKRIGFWIKALLIPLQLMKMVDVDSSMTSEDLCELVNRTAWEWVLINHREAVIGSRGGFDYQLMDISGEILNPNEMQLSRIFPLLHKIVAFPVHIPRFKY* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00303 233 ProSiteProfiles dnaJ domain profile. 37 103 IPR001623 -
Pte4g00303 233 Pfam DnaJ domain 37 100 IPR001623 -
Pte4g00303 233 CDD DnaJ 37 92 IPR001623 -
Pte4g00303 233 Gene3D DnaJ domain 34 138 IPR036869 -
Pte4g00303 233 ProSitePatterns Nt-dnaJ domain signature. 80 99 IPR018253 -
Pte4g00303 233 PANTHER DNAJ HOMOLOG SUBFAMILY B 34 105 - -
Pte4g00303 233 SMART dnaj_3 36 95 IPR001623 -
Pte4g00303 233 MobiDBLite consensus disorder prediction 1 30 - -
Pte4g00303 233 SUPERFAMILY Chaperone J-domain 36 129 IPR036869 -
Pte4g00303 233 PRINTS DnaJ domain signature 39 57 IPR001623 -
Pte4g00303 233 PRINTS DnaJ domain signature 95 114 IPR001623 -
Pte4g00303 233 PRINTS DnaJ domain signature 57 72 IPR001623 -
Pte4g00303 233 PRINTS DnaJ domain signature 75 95 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00303 Pte-Chr4 12743081 12745150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00303 38 100 C2H2 Transcription Factor Family AT1G74250 44.776 1.05e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00303 K09510 - osa:4339609 114.005