Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00292 ATGGCAACCTCCGCATGCCAACAATCAGCGTTTGCTGGCCAGACAGCGGTCAACCAAAACAATGAGTTTTTCAGAAGGGTTGGTGCCATTGGTGGCAGCCGCATCAACATGCGCCGTACAGTGCAAAGTGCTCCCAAGAGCATCTGGTATGGCCCAGACCGTCCCAAGTACTTGGGACCATTCTCGGAACAAATTCCATCATATTTGACTGGGGAATTCCCTGGTGACTATGGTTGGGACACTGCTGGATTGTCTGCAGACCCTGAGACCTTTGCTAAGAACCGGGAGCTTGAAGTAATTCACTGCAGATGGGCTATGCTTGGTGCATTGGGATGTGTCTTCCCAGAAGTCCTTGCAAAGAACGGAGTCAAGTTTGGTGAGGCAGTGTGGTTCAAAGCTGGTGCTCAAATCTTCTCTGAAGGCGGTCTTGATTACCTTGGTAACCCAAACCTCATCCATGCTCAGAGCATCCTTGCAATCTGGGCATGTCAGGTTGTACTCATGGGGTTGATTGAAGGTTACAGAGTTGGTGGGGGTCCTCTTGGTGAAGGACTTGACCCAATCTACCCGGGTGGTGCTTTTGACCCTCTTGGATTGGCTGATGATCCTGATGCATTTGCTGAGTTGAAGGTGAAGGAAATCAAGAATGGAAGATTGGCAATGTTCTCCATGTTTGGATTCTTTGTTCAGGCCATTGTTACTGGCAAGGGACCAATTGAGAACCTCTCTGACCATATTGCTGATCCAGTGGCCAACAATGCTTGGGCTTATGCCACTAACTTTGTTCCTGGAAAATGA 798 0.4912 MATSACQQSAFAGQTAVNQNNEFFRRVGAIGGSRINMRRTVQSAPKSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEVLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00292 265 Pfam Chlorophyll A-B binding protein 66 231 IPR022796 -
Pte4g00292 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Pte4g00292 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 265 IPR001344 GO:0009765|GO:0016020
Pte4g00292 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Pte4g00292 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00292 Pte-Chr4 11640890 11642562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00292 1 266 Chloroplast and Mitochondria Gene Families AT2G05070 84.962 1.87e-175 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00292 K08913 - rcu:8273545 516.153