Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00275 ATGAAAGAAGCACCTGCTCAGGGATCTGGTGCTCCTGTTTCTGCAACGCATTCAGTTAAGGAAGGAAGCATCATCTCCTCATCGCATGATAATACATTCCAAAGTCCTGATACTAGTCTCCTTCCCCTTCAATCTACTGTGGAAGGAAGTTCTGAGAAAGTCCCAGAAGATGGATACAACTGGCGTAAGTATGGGCGGAAACAAGTTAAAGGAAATGAATTCATAAGGAGCTATTACAGATGCACTCGTCCGAACTGCCCGGCAAAGAGGCAATTGGAGAGGTCACATGATGGAAGGATAACAGATACTACATATTTTGGTCAGCACGATCATCCTAAACCTCATTCCAATATACCAACAGCTGTTGCTTTTGATGTGAGCATCATCGAAAGACGATCCAATGTTCCATCAACAAAAACGGGAGGGGAAACTGCAGTTGAACCTGATCATACAACTTCAAGAGTTTCACAAAGTGATTATGTGAAAGGCATGCATTCAGAATGGACCAAGTTACTAAAGGACAAGGCTCATAAAGAAAGGGATCTGGAGCCCAAAAGACGGAAGAAGGACAATGATCATGCAGCTCCATCTCCTATCGGTGAGCCACGGGTTGTTGTTCACACTCAGTCAGAGGTTGATATTGTTAATGATGGATACAGATGGAGAAAATATGGGCAGAAACTAGTAAAAGGAAATGAAAATCCAAGGAGTTATTACAGATGCTCAAGCCCTGGATGCCCAGCTAAAAAGCATGTAGAGAGGGCTTCTTATGATGCAAAAGTTGTCATAAACACCTATGAGGGACAACACAGCCATGATTTGCCTCCTTCAAGGACCATAACTCAAAACATTGGAGTAAATATTCATGCAACTACCCATCAACCAGAATCAGAAGCTGAGCCGGAAAATAATGCCGCTGACCTGAGTGCAGGTGAAAATACTAGCAAGGAGCTAGTAGGTAGATCAGATAAGCAAGTTCATGGAGAGGAAACAACTAGGTCTGAGGTCGATAATGCTGTCACTCATCCCGCTAAGTACTCTGAATTTAGATCCCTTGTACAAGGTCAACAAAATGGCAAGGCTGATACTGTTAAAGGAGGTGACTCTGTTAGTATTCATGATAAAGTGATTACATCTGTTCCCAATAAGCATGAAACTGGTGGTGATTTACAAACTCAGACAGCAGAAAAAAAAGTTGTTTCGCAAGATATAGTTACCCAGGACATCTCTGATTTTGAGAGGAATAAAGACGAAGGGGAAACATCTACTACCAATGTTTTCCAAAGCTAA 1290 0.4217 MKEAPAQGSGAPVSATHSVKEGSIISSSHDNTFQSPDTSLLPLQSTVEGSSEKVPEDGYNWRKYGRKQVKGNEFIRSYYRCTRPNCPAKRQLERSHDGRITDTTYFGQHDHPKPHSNIPTAVAFDVSIIERRSNVPSTKTGGETAVEPDHTTSRVSQSDYVKGMHSEWTKLLKDKAHKERDLEPKRRKKDNDHAAPSPIGEPRVVVHTQSEVDIVNDGYRWRKYGQKLVKGNENPRSYYRCSSPGCPAKKHVERASYDAKVVINTYEGQHSHDLPPSRTITQNIGVNIHATTHQPESEAEPENNAADLSAGENTSKELVGRSDKQVHGEETTRSEVDNAVTHPAKYSEFRSLVQGQQNGKADTVKGGDSVSIHDKVITSVPNKHETGGDLQTQTAEKKVVSQDIVTQDISDFERNKDEGETSTTNVFQS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00275 429 SUPERFAMILY WRKY DNA-binding domain 207 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte4g00275 429 ProSiteProfiles WRKY domain profile. 50 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte4g00275 429 MobiDBLite consensus disorder prediction 292 342 - -
Pte4g00275 429 Gene3D WRKY domain 44 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte4g00275 429 FunFam WRKY transcription factor 57 201 275 - -
Pte4g00275 429 MobiDBLite consensus disorder prediction 384 400 - -
Pte4g00275 429 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 300 IPR044810 GO:0003700
Pte4g00275 429 MobiDBLite consensus disorder prediction 317 336 - -
Pte4g00275 429 MobiDBLite consensus disorder prediction 1 58 - -
Pte4g00275 429 SUPERFAMILY WRKY DNA-binding domain 53 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte4g00275 429 MobiDBLite consensus disorder prediction 378 400 - -
Pte4g00275 429 MobiDBLite consensus disorder prediction 166 196 - -
Pte4g00275 429 FunFam WRKY transcription factor 44 115 - -
Pte4g00275 429 MobiDBLite consensus disorder prediction 133 204 - -
Pte4g00275 429 ProSiteProfiles WRKY domain profile. 210 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte4g00275 429 Gene3D WRKY domain 202 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte4g00275 429 MobiDBLite consensus disorder prediction 133 163 - -
Pte4g00275 429 MobiDBLite consensus disorder prediction 11 51 - -
Pte4g00275 429 MobiDBLite consensus disorder prediction 410 429 - -
Pte4g00275 429 Pfam WRKY DNA -binding domain 56 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte4g00275 429 Pfam WRKY DNA -binding domain 216 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte4g00275 429 SMART WRKY_cls 215 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte4g00275 429 SMART WRKY_cls 55 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00275 Pte-Chr4 10738840 10743624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00275 41 283 WRKY Transcription Factor Family AT2G04880 51.698 3.44e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte4g00275 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00275 K18834 - cave:132180287 342.428