Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00269 ATGGCATCAAAGAAAACTGAGATCATATCCGTAACCACAATCAAGCCTTCTTCACCCACTCCACCTCACCTTCGAACTTTCAAACTCTCACTTCTAGACCAGCTCACCTCCAATGACTATGGTAATCTCACCTTTTTCTATCCCTATAACAATTCTGCCTCATTCATTAATGGTTCTAGCGATCACCATCGTCATCATAATGATTCTACTAATTGTTACTATTCCAACTCCAAACTTCTTCAAAAAGCTTTGTCTGAAACTCTAACTCACTTCTATCCTTTGGCTGGGAGATTGCAAGATGATAGCACCATCGCTTGCAATGATGAAGGTGTTTTCTTCACCGAGTCCAAAACCAATTATCTTCTTTCTGACATTTTGGCATCTCCTGACTTGGACCTTATTTATTCTGAGTTTAACTCAATAAACCATCGTGAAGCCATGCAGGTACCTAATGCACCTACGATACTCTTCAATTTCGTACTGTTTGGCTGTGGTGGCACTGCTGTGAGTTTGGCAGTATCACACAAAGTATTTGACATGTTTTCCTTGATGACATTCCTCAAAAGTTTAAGTGCAGCTTGTTCTGGCTCTGCTGAACTCATTGTCCCAGATTTTCATGCTGCACCAACCCTCTTCCCATCAAGACAGATGCCAAATCTTGCATCATTTTCTAGTCCACGAAAGGTTAAAGCGATAAGTTTCGTGTTCACTGCATCAAAAGTCCAAGAGCTCAAAACTATGGCTGCAAACGGCCTTAAGGAAGAAGGTTATGAATTTGGTTACCTTTCTCGTGTGAATGTTGTGATGGCATTTCTTTGGAAATGCCTTGCAACCATTTCCATATCCCAAAAAGGTTTCTTCAGACCAATTGTGATGGTACAAGCAGCTAATCTCCGAAACCGAATTGGACAGCCATTACCCTTTAATGCTATGGGGAACCTTTCATTCACCTATGCCACAGACATAGTTAAAAAGGAGAATGATGTTCAATTCATTGAGTTGCTCAAGAGGCAGTTGGAGTTGAAAGTTTCAATTGATGAGAGGGCCAAAAGGTTCAACGCACACGAAGCAGTTCGAGCATCGACAGAAGAAATTGGAGAGCTATTCAGTAACAGCGATCAACTGAACCTTTACACTGCCTCAAGTTGGTGTAGGTTTGAATTTTATGAAATGGATTTTGGAATGGGCAAGCCAATTTGGATGTCATTTATTTTTCCAGGATTCCAGACAAATAATATTACTTTGTTGGACACAGAAGTGGAGGGTGAAGTTGAAGCAGTACTGCATTTAGAAGAAGAAATTATGGAAGAATTCCGGCACAACAAGGAACTTCTACAGTTTGCTGTGTTTAAGAGAATCGATATCCCCCAAACTTTTGGATTTTGCAAAATTACCCCCAAACTTTAG 1407 0.4051 MASKKTEIISVTTIKPSSPTPPHLRTFKLSLLDQLTSNDYGNLTFFYPYNNSASFINGSSDHHRHHNDSTNCYYSNSKLLQKALSETLTHFYPLAGRLQDDSTIACNDEGVFFTESKTNYLLSDILASPDLDLIYSEFNSINHREAMQVPNAPTILFNFVLFGCGGTAVSLAVSHKVFDMFSLMTFLKSLSAACSGSAELIVPDFHAAPTLFPSRQMPNLASFSSPRKVKAISFVFTASKVQELKTMAANGLKEEGYEFGYLSRVNVVMAFLWKCLATISISQKGFFRPIVMVQAANLRNRIGQPLPFNAMGNLSFTYATDIVKKENDVQFIELLKRQLELKVSIDERAKRFNAHEAVRASTEEIGELFSNSDQLNLYTASSWCRFEFYEMDFGMGKPIWMSFIFPGFQTNNITLLDTEVEGEVEAVLHLEEEIMEEFRHNKELLQFAVFKRIDIPQTFGFCKITPKL* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00269 468 Pfam Transferase family 5 444 - -
Pte4g00269 468 Coils Coil 322 342 - -
Pte4g00269 468 Gene3D - 3 221 IPR023213 -
Pte4g00269 468 Gene3D - 229 449 IPR023213 -
Pte4g00269 468 PANTHER F21J9.9 7 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00269 Pte-Chr4 10343383 10344944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00269 76 438 Monolignol Biosynthesis Gene Families AT5G48930 24.439 6.90e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00269 - - qsa:O6P43_014533 337.806