Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00262 ATGCCGTCTTCCGGAACATCTAAACACCCGAAGACACATCTGTTGTCCTTCTTAGACCAGATTGCTGCATCCATCCAAGTGCCTGTTATACTTTTCTATTCATTTGGAGATGATGCAGGCACTCCCGAGATCCATGTTGATGATATGAACAAGAAAAGGTTGGAATCGTTGAAGCAATCACTATCCAAAACATTGTCAAGCTTTTATCCATTGGCTGGAAGATTTAGTGACGACAAGAACTCCATTGTCTGCTCTGACGAGGGTGTCTATTTTGTGGAGGCCAGTGCCAACTCTAATATATCCCATTTTCTCCGACGACCTGAGTTATTGCACAAGCTGTTACCACCAGCTGGTGCAACAGACAATGTTGCTTCGGTACAAATGACCCGATTTATATGTGGTGGCATGGCGATCGGTGCTTCAATTTCTCATAAAATACTTGATGCTTCTTCAATGAGTTTTTTTCTACGAAGTTGGGCTGCCACCACAAATGATGATAGAAAGTCTCATCACATATCAGCTCCAAATTTTGATGGTTCAAACTTATTTCCACAAACTGATACTTGTACAGATTTTATAGCTATGATTATGCCTTTCTTAAAAAGAGGAAGGTCAGCTACCAAGAGGTTTGTGTTCGATGCTGAAGCTATTATTGCGCTTAAAGCTAAAGCATCCACCTCCACCTGCAAGCGGAGCCCTTCTCGATTTGAAGCAGTATCAGCTTTCATCTGTAAATCCATGGCAGCTACAATGAAAGCTAGGTCTGGCAAACCCAAATCAATATATACAACACATCTAGTGGATATACGTCGTAGAGCAATGCCTTCATTTCCCGAATCATGGATGGGGAATTATGTAGGCCTAGCACCTGCAGCTTTGGGCATCATAGACCAAGACATGGAATTACAGGATTTGGTTATTAAATTGAGGGAAGAAATAACGAAGACCTTTAATTCTGATTTTATAAAGAGTTTGCAAAGTGAACCTGAAAAATTCTGGGAGATCCAGAGAGAAATCGTCGAAGTTGCAGCGGGTACAGAGGTTGAATATATTGGATTCAATAGTTGGTGTAACATGGGCTTCTATGACGTTGACTTTGGATGGGGAAAACCCATGTGGACTGCCAATCAAGCAGTTTCACACCAGTTTAGCGATGATTACTTCAATTTGGTGTTTCTTATGGATACAAGATCCAAAGATGGAGTTGAGGCCTGGATAACTTTGCATGAAGAAGAAATGGCTATCTTAGAACAAGATAAGGAATTCATTGCTTCTGTTGCTCTAAATCCAGAGTCCATGATTCCGTAA 1308 0.4121 MPSSGTSKHPKTHLLSFLDQIAASIQVPVILFYSFGDDAGTPEIHVDDMNKKRLESLKQSLSKTLSSFYPLAGRFSDDKNSIVCSDEGVYFVEASANSNISHFLRRPELLHKLLPPAGATDNVASVQMTRFICGGMAIGASISHKILDASSMSFFLRSWAATTNDDRKSHHISAPNFDGSNLFPQTDTCTDFIAMIMPFLKRGRSATKRFVFDAEAIIALKAKASTSTCKRSPSRFEAVSAFICKSMAATMKARSGKPKSIYTTHLVDIRRRAMPSFPESWMGNYVGLAPAALGIIDQDMELQDLVIKLREEITKTFNSDFIKSLQSEPEKFWEIQREIVEVAAGTEVEYIGFNSWCNMGFYDVDFGWGKPMWTANQAVSHQFSDDYFNLVFLMDTRSKDGVEAWITLHEEEMAILEQDKEFIASVALNPESMIP* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00262 435 Pfam Transferase family 2 422 - -
Pte4g00262 435 Gene3D - 204 427 IPR023213 -
Pte4g00262 435 Gene3D - 1 193 IPR023213 -
Pte4g00262 435 PANTHER F21J9.9 2 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00262 Pte-Chr4 9448639 9450100 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00262 55 418 Monolignol Biosynthesis Gene Families AT5G48930 24.242 7.53e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00262 - - pvy:116112663 332.413