Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00259 ATGGAGCTTTCAATAGTTTCTGAAGAAAACATCACGCCTTCTTCCCCAACTCCCCACCACCTAAGGGCTCATCTGTTGTCCTTCTTAGACCAAGCTGTTCCACCCTTCTATGCCCCTATCTCACTTTTCTACTCAGTCGGTGCTGATATAGGCACTTGTGAGGTCAATGTGGGTGATGTTTTAAAGAGAAGATTACGGTTATTGAAGCAATCACTGTCCAAAACATTGTCTAGCTTCTATCCACTGGCTGGAAGGCTTAACGACGAGATATCCATTGAATGCAGCGACGAGGGTGTCTATTTTAAAGAGGCCTATGTCAATTCGGCACTATCTGAGGTTCTCCAACAATCCGAGTTCTTTCACAACTTGCAGCCTGGTGATGGAGAACTCATAACTTCGTCAAAGAAAATTGCTATGGTACAAGTAACGCGTTTTGCATGCGGTGGCATGGCGATTTCTGCTTTGATTTCTCATAAAATAGTTGACGCTTGTTCACTTAGCTTTTTCCTTAGAAGTTGGGCTGCCATGGCAAGGAGTGATAGCAAGCCTGGTCAAACAGAGGTTCCAGATTTTGATGGCTCGACCCGTTTCCCAACAACTGATGCTCTCCCAGATCCTACAGCTATGCTACCAGCTGTCGCCATCAAAACAGGCAGGTCTGCTGCCAGAAGGTTTATGTTTGATGCTGAAGCTATAGCTGCACTAAAAGCAAAATCATCTAGCTCCAGATGCAAGCAGAAGCCTTCTCGGGTTGAAGTTGTATCCGCACTCTTATGGAAATCCATTGCAGCTGCAGTAAAAGCCAGATGTGGCACAGCGAGGCCAATATGTATAAAACATGCAGTGGATCTACGCCGTAAAGCTTCGCCACCATTTCCAGAGTCATGCATGGGAAATTACGTGGGGCAAGCACCTGCACTATTGGGCGTGGCAGATGAAGATATTGAGCTTTCAGAGTTGGTTATGAAACTGAGGGAAGCAATAACAACGACCTATCATTCAGATTTTGTCAAGCGTTTGCAAAGTGAACCTACAAAATTGTTGGACATCCTCATAGAGATGCAAGAGTCCGCTGTTACTGCTGCAACTGTTGATGGTTCAAACGTCAAACCAGAGTATATTGCATTTAGTAGTTTGTGTAACTTAGGCTTTTATGATATTGACTTTGGATGGGGAAAGCCCATGTGGATTACTCCGGTGCTCTCTCTAGCTAATACAAGCGACATTTACATGAATGTTGTGTTTCTTATGGATACACCATCCAAGGACGGAGTTGAGGGCGTGATAACTTTAGGCGAAGAAGACATGGCGTTGCTAGAACAAGACAAGGAATTCACTGCTTTTGCAACTTTGGACCAAAATCCTCCTAGTCTATACAACAATGAACACAACACAAAAGAGTAG 1404 0.4437 MELSIVSEENITPSSPTPHHLRAHLLSFLDQAVPPFYAPISLFYSVGADIGTCEVNVGDVLKRRLRLLKQSLSKTLSSFYPLAGRLNDEISIECSDEGVYFKEAYVNSALSEVLQQSEFFHNLQPGDGELITSSKKIAMVQVTRFACGGMAISALISHKIVDACSLSFFLRSWAAMARSDSKPGQTEVPDFDGSTRFPTTDALPDPTAMLPAVAIKTGRSAARRFMFDAEAIAALKAKSSSSRCKQKPSRVEVVSALLWKSIAAAVKARCGTARPICIKHAVDLRRKASPPFPESCMGNYVGQAPALLGVADEDIELSELVMKLREAITTTYHSDFVKRLQSEPTKLLDILIEMQESAVTAATVDGSNVKPEYIAFSSLCNLGFYDIDFGWGKPMWITPVLSLANTSDIYMNVVFLMDTPSKDGVEGVITLGEEDMALLEQDKEFTAFATLDQNPPSLYNNEHNTKE* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00259 467 PANTHER F21J9.9 4 449 - -
Pte4g00259 467 Pfam Transferase family 2 445 - -
Pte4g00259 467 Gene3D - 219 448 IPR023213 -
Pte4g00259 467 Gene3D - 1 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00259 Pte-Chr4 9056590 9057993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00259 1 441 Monolignol Biosynthesis Gene Families AT5G48930 26.840 1.03e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00259 - - pvy:116112663 353.984