LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte4g00249	ATGGATGAGCAGATTTACATCGTTGCTGTCGCAAAACCAGCTGAAGGTCATAAACAAAGCTGGTATGGCTCTGTTCTGCTACGAAAAAGCCAAGAGGGTAATATCATTTTCAATTACTCAAATGTGCTAAATGGTTTTGCAATCAGAATGACAGAACAGGAAGCTAAAGCTATGAAAAACAGTGGAGGGTTTGTATCAGCTAAGCCTGAGAAGCTTCTTTCTTTGCACACAACTCACAGCCCAGAATTTTTAGGCCTGCGTTTGAATTCTGGGATATGGAGTGACTCAAATTTAGGAAAAGGGATCATCATTGGTGTTCTGGACTCAGGGATAAACCCAGATCATCCTTCATTCTCTGATGAAGGGATGCCTCCTCCACCGGCTAAATGGAAAGGAACCTGTGAATTTCCCAATGGGACATGTAACGCAAAGCTTATTGGTGCAAGAAATTTTGTCAGCAATGAAAGTGGACTGCCGCCATTTGATGAAATAGGCCATGGAACACACATGGCTGGCATAGCAGCTGGAAATTTTGTCAGAAATGCTAGTGTATTCGGAATGGTGCAAGGCAAAGCTTCTGGTATGGCCCCCCATGCTCACCTAGCAATTTACAAAGTATGTAATAAGGAAGGTTGTCCCGAGAGTGCCATCTTAGCAGCGATCGATGCCGCCATCGAGGACGGCGTCCACATAATTTCATTGTCCCTTGGTGGAGAGTCTGTTCGTTACTCTGACAGTTTCCTTGCGGTGGGAGCATTTGCAGCAATTCAAAGAGGAATCCTTGTGAGTTGTTCAGCTGGAAATGATGGCCCTTTGGTAGCTTCTTTGATAAACGAAGCTCCATGGCTTCTGACTGTTGGAGCAAGCACCATTGATAGAAGATTTAGAGCCAGTATAGTGCTTGGAGATGGTGAAGCCTATAATGGGGAATCGCTATTTCACGATTTCAATTTGAAATCTTTACCTCTCGTATACACTCGCAATTGTCTCCCAGGAATGTTCAGCAACATTTCTGTTGAAGGAAAAATCGTTGTATGCGAGAAAACGGAAAAGATTTCACCAATTGATCAAGCTATAGGAGTGAAGACTGCTGGTGGGGCAGCCATGATTCTCACGAACAAGAGATATGAAGGCTTTGATACAGCAGCTGACCATTATGCTCTTCCTGCTGCACATGTCAGTTTCGATGCCGGAACCAAGATAAGAACTTATATAAACTCATGCTCAAATCCAACAGCAATAATCATGTTCATGGGAGCTGTAACCGGAGATAAGCTTGCTCCTGTATTGGCTTCCTTTTCTTCCATCGGCCCCAACATGCAAAGCTTGCATATTCTAAAGCCTGACATCATTGGACCGGGAGTCGAAATTTTAGCAGCATGGACTAATTCAATTGAGAGTAGTGTAAATTCTCAAGCAACATTTCATGTTTTCTCAGGTACTTCTGTATCGTCATCTCACCTTAGTGGCATTACAGCTTTGATCAAAAGCGTTCACCCTGACTGGTCTCCGGCTGCAATCAAATCAGCAATGATGACCACAGCGGACATAGCAAACCTTGAAGGCATGCCTATAGTGGGTCATGCATTTACACCAGCTGTAATGAGTAGCACGGGTGCTGGACATGTCAACCCATCCAAGGCAATCGATCCGGGGCTTGTTTACGACATAGAGACTGAAGATTACATAGCATTTCTCTGTGGTTCAGATTATACTGACAGTGAGGTCACCACCATTGCTAAACGTGAAGTCAAGTGTTCTGAAGTAAATCCTATCAAACAAGAACAACTAAATTACCCTTGTTTTGTGCTTTCAATGGGGTCAGATGCGGAAGCTCAATCCTTCACAAGGACATTGACAAACGTTGGCCCTGCAAACTCAACCTACTCAGTGAATGTGGAAATCACTGAATCCACAGCATTGGGTGTGGATGTAAAGCCAAGTACGATCACATTCAGCGAGGTAAAGCAGAAGGTGACATTCACAGTTAAGTTCTTCGTAGCATTTAAAAACAATGACATTAGTGCTGCCGGTTACCTGAGATGGATTTCAGACACGCACTCTGTAACCATCCCTATATCTGTCAATTTTTTCTGA	2097	0.4368	MDEQIYIVAVAKPAEGHKQSWYGSVLLRKSQEGNIIFNYSNVLNGFAIRMTEQEAKAMKNSGGFVSAKPEKLLSLHTTHSPEFLGLRLNSGIWSDSNLGKGIIIGVLDSGINPDHPSFSDEGMPPPPAKWKGTCEFPNGTCNAKLIGARNFVSNESGLPPFDEIGHGTHMAGIAAGNFVRNASVFGMVQGKASGMAPHAHLAIYKVCNKEGCPESAILAAIDAAIEDGVHIISLSLGGESVRYSDSFLAVGAFAAIQRGILVSCSAGNDGPLVASLINEAPWLLTVGASTIDRRFRASIVLGDGEAYNGESLFHDFNLKSLPLVYTRNCLPGMFSNISVEGKIVVCEKTEKISPIDQAIGVKTAGGAAMILTNKRYEGFDTAADHYALPAAHVSFDAGTKIRTYINSCSNPTAIIMFMGAVTGDKLAPVLASFSSIGPNMQSLHILKPDIIGPGVEILAAWTNSIESSVNSQATFHVFSGTSVSSSHLSGITALIKSVHPDWSPAAIKSAMMTTADIANLEGMPIVGHAFTPAVMSSTGAGHVNPSKAIDPGLVYDIETEDYIAFLCGSDYTDSEVTTIAKREVKCSEVNPIKQEQLNYPCFVLSMGSDAEAQSFTRTLTNVGPANSTYSVNVEITESTALGVDVKPSTITFSEVKQKVTFTVKFFVAFKNNDISAAGYLRWISDTHSVTIPISVNFF*	699

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte4g00249	698	Gene3D	-	566	697	-	-
	Pte4g00249	698	CDD	Peptidases_S8_3	75	516	IPR034197	-
	Pte4g00249	698	Gene3D	-	292	422	-	-
	Pte4g00249	698	CDD	PA_subtilisin_like	298	415	-	-
	Pte4g00249	698	Pfam	Subtilase family	99	516	IPR000209	GO:0006508\|GO:0008236
	Pte4g00249	698	ProSiteProfiles	Serine proteases, subtilase domain profile.	82	549	-	-
	Pte4g00249	698	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	29	695	IPR045051	-
	Pte4g00249	698	Pfam	Fibronectin type-III domain	596	695	IPR041469	-
	Pte4g00249	698	SUPERFAMILY	Subtilisin-like	91	553	IPR036852	GO:0004252\|GO:0006508
	Pte4g00249	698	Pfam	PA domain	322	400	IPR003137	-
	Pte4g00249	698	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	104	115	IPR023827	-
	Pte4g00249	698	PRINTS	Subtilisin serine protease family (S8) signature	99	118	IPR015500	-
	Pte4g00249	698	PRINTS	Subtilisin serine protease family (S8) signature	162	175	IPR015500	-
	Pte4g00249	698	PRINTS	Subtilisin serine protease family (S8) signature	479	495	IPR015500	-
	Pte4g00249	698	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	76	IPR037045	-
	Pte4g00249	698	Gene3D	Peptidase S8/S53 domain	101	562	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte4g00249	Pte-Chr4	8357392	8359488	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte4g00249	2	697	Subtilisin-like Serine Gene Family	AT5G67360	42.292	0.0	533

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte4g00249	-		-	qsa:O6P43_024262	741.11