Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00248 ATGATTCAAGGAGAGACCGAGATATTGTCAAAGACTCTCATCAGACCTTCTATTCCAACACCCCACCAACTCAAAATCCACAGAGTTAGTCTTCTAGATCAACTCTCCCCTAACCTTCACAATGTTTTTACCTTCTTCTACCATAAAGATTTCAAATCTTCCAATGGCAACTACAAGTCAACATTTTCAAAAAGGTCTCAGCTTCTTCAAAAGTCGCTCTCTGAGACTCTCTCTCTCTTCTACCCTTTTGCCGGAAGATTCAAAGATGATGCCACCATCTTATGCAATGACGATGGTGTTGTCTTCTTTGAAGCAAAGACTGAGATACGTCTCTTTGATCTCCTCTCCCATCCTGACTTGGACGCTATAGGCTCTCACTTCCTTTATGCTACTAGCGACTTCAAACACAGAACACAACTGCAACGTCCCATGATACTCATTGGATTCACCTTGTTTGGATGTGGAGGCACTGCCTTGAGCATGTGTATCACTCACAAGAATGCTGACTTTGCATCAGTGGTCACACTGTTACAGTGCTGGACTGCGGCTTGTAGAGGAGCCAAGCAAATTGTAGTACCGGACTTGAACATAGCAGCCTCACACATACCACCGAGAGTAATCTCCGGCATATCAGAATCTGTTGTTCTCAGTACCAAGAAGATTGCTTCAAGGAGGCTCGTCTTCACCGCATCCAAGATTACAGAACTCAAAGCTAAGGTATTATCTGGAGGTGGGTTGAAACATTATCCTTCACGAGCTGACGTTGTGGCGGCGCTCATATTGAAATGTGCTATGGCAGCTTTCGTACATAAGATGGGGAAATTTAAGCCAACAGTGCTGATGCAAGCTGCAAACCTCAGAACTCGAATGGATCCACCTCTACCTGAAAATTCAATTGGGAATCTGGCTTGGCTATTCCCAGTGATGGTAGAGAATGAGAGTGAAATGGAAATATACGAGTTGGTAAAGAAGATGATAGCCTTGAAAGCATCTCTCAAGAACAAGGTGAATAAATTCAGTAGTGAAACCATTGTTGAAGCTGTGAAGGAGGGACTGGAAGAAAGAGAACAATTTCTTAAAAATGATAAGCATCATGCTGTTTATCTCTGTGCCAGCTGGTGCAAGTTTCCAATGCTGGAACTTGATTTTGGTTGGGGAAAACCAATGTGGGTGCCTTGCATTGGAAAAGCTAATCTAATGGGAAATACCATACATTTGCTTGATACAAAAATAGCTGGTGAAGTTGAGGCATTGGTATATCTTGAGGAGGATGAAATGGATATGTTCCAACACAACGCAGAGCTGCTTCAATATGCTTCCATTAATCCTAGTATTACTTACATTCGACCAAACTTGTAA 1359 0.4253 MIQGETEILSKTLIRPSIPTPHQLKIHRVSLLDQLSPNLHNVFTFFYHKDFKSSNGNYKSTFSKRSQLLQKSLSETLSLFYPFAGRFKDDATILCNDDGVVFFEAKTEIRLFDLLSHPDLDAIGSHFLYATSDFKHRTQLQRPMILIGFTLFGCGGTALSMCITHKNADFASVVTLLQCWTAACRGAKQIVVPDLNIAASHIPPRVISGISESVVLSTKKIASRRLVFTASKITELKAKVLSGGGLKHYPSRADVVAALILKCAMAAFVHKMGKFKPTVLMQAANLRTRMDPPLPENSIGNLAWLFPVMVENESEMEIYELVKKMIALKASLKNKVNKFSSETIVEAVKEGLEEREQFLKNDKHHAVYLCASWCKFPMLELDFGWGKPMWVPCIGKANLMGNTIHLLDTKIAGEVEALVYLEEDEMDMFQHNAELLQYASINPSITYIRPNL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00248 452 PANTHER F21J9.9 7 440 - -
Pte4g00248 452 Gene3D - 218 440 IPR023213 -
Pte4g00248 452 Pfam Transferase family 7 435 - -
Pte4g00248 452 Gene3D - 5 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00248 Pte-Chr4 8308338 8309891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00248 7 430 Monolignol Biosynthesis Gene Families AT5G48930 22.940 1.15e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00248 - - qsa:O6P43_014533 439.884