Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00246 ATGGCATCAAAGAAGACTGAGGTCTTGTCCGTAACCACAATCAAGCCTTCTTCACCCACTCCACCTCACCTTCGAACTTTCAAACTCTCACTTCTAGACCAGCTCTCCCCCAATGTCTATGGCAATCCCACCTTTTTCTATCCCTATAACAATGCTGCCTCATTCATAAATGGTGATAGCGATCATCATCATCATCACGATTCCACTCATTCTTACTATTCCAACTCCAAACTTCTTCAAGAAGCTCTGTCTGAAACTCTAACTCTCTTCTACCCTTTGGCTGGGAGATTGCAAGATGATAGCACAATCGCATGCAATGATGATGGCGTCGTCTTCACTGAGTCCAAAACCAATTATCTTCTTTCTGACATTTTAGCATCTCCTGACTTCGACCTTATTTATAATGAGTTTAACTCAATAAACCATCGTAAAGCCATGCAGGTAGCTAATGGACCTATGATATTCTTCAATTTTATACTGTTTGGCTGCGGTGGCACTGCTGTGAGTGTGGCAGCATCGCACAAAGTATTTGACATGTTTTCCTTGATAACATTCCTCAAAAGTTTAAGCGCTGCTTGTTCTGGATCTGCTGAACTCATTGTCCCAGATTTTCACGCTGCACCAACCCTCTTCCCATCAAGACAGATGCCAGCTCTTGCACCATTTTGCAGTCCACGAAAGGTTAAAGCGATAAGTTTCGTGTTCACTGCATCAAAAGTTCAAGAGCTCAAAACTATGGCTGCAAACTGCCTCAAGGAAGAAGGTTATGAATTTGGTTACCTTTCTCGTGTGAATGTTGTGATGGCATTCCTTTGGAAATGCCTTGCAACCATTTCCATATCCCAAAAAGGTTTCTTCAAACCAACTCTGATGGTACAAGCAGCTAATCTCCGAAACCGAATTGGACAGCCATTACCCTCTAATGCTATGGGGAACCTTTCATTCACCGATGCCACAGACATTGTGAAAAAGGAGAATGATGTTCAATTCATTGAGTTGCTCAAGAAGCTGTTGGAATTGAAAGTTTCAATTGATAAAAAGGCCAAAAGGTTCAACGCAGATGAATTGGTTCGAGCATTGACACAAGAAACTGGAGAGCTATTCAGTAACGGCGATCAAGTGAACCTTTACAGTGCCTCAAGTTGGTGTAGGTTTGAATTCTATGAATTGGATTTTGGAATGGGCAAGCCAATTTGGACGACATGCATTTTTCCAGAATTCCTGACAAATAATATTACTTTGTTGGACACAAAAGTGGAGGGTGAAGTTGAAGCTTTACTGCATTTAGAAGAAGAAGTGATGAAAGAATTCCAAGACAACCAGGAACTTCTACAGTTTGCTGTGCTCAAAAGAATTGATATATCACAAAGTTGA 1374 0.4134 MASKKTEVLSVTTIKPSSPTPPHLRTFKLSLLDQLSPNVYGNPTFFYPYNNAASFINGDSDHHHHHDSTHSYYSNSKLLQEALSETLTLFYPLAGRLQDDSTIACNDDGVVFTESKTNYLLSDILASPDFDLIYNEFNSINHRKAMQVANGPMIFFNFILFGCGGTAVSVAASHKVFDMFSLITFLKSLSAACSGSAELIVPDFHAAPTLFPSRQMPALAPFCSPRKVKAISFVFTASKVQELKTMAANCLKEEGYEFGYLSRVNVVMAFLWKCLATISISQKGFFKPTLMVQAANLRNRIGQPLPSNAMGNLSFTDATDIVKKENDVQFIELLKKLLELKVSIDKKAKRFNADELVRALTQETGELFSNGDQVNLYSASSWCRFEFYELDFGMGKPIWTTCIFPEFLTNNITLLDTKVEGEVEALLHLEEEVMKEFQDNQELLQFAVLKRIDISQS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00246 457 Pfam Transferase family 5 443 - -
Pte4g00246 457 Gene3D - 228 448 IPR023213 -
Pte4g00246 457 Gene3D - 3 219 IPR023213 -
Pte4g00246 457 PANTHER F21J9.9 7 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00246 Pte-Chr4 8243251 8244882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00246 5 438 Monolignol Biosynthesis Gene Families AT5G48930 23.028 1.13e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00246 - - qsa:O6P43_014533 337.806