Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00245 ATGCCACAAATGAGGAGGAATGCCATCAAGATGTTCACAGCCCTCAGCGATCATCATCATCATCACGATTCCACTCATTCTTACTATTCCAACTCCAAACTTCTTCAAGAAGCTCTGTCTGAAACTCTAACTCTCTTCTACCCTTTGGTTGGGAGATTGCAAGATGATAGCACAATCGCATGCAATGATGATGGCGTCGTCTTCACTGAGTCCAAAACCAATTATCTTATTTATAATGAGTTTAACTCAATAAACCATCGTAAAGCCATGCAGGTAGCTAATGGACCTATGATATTCTTCAATTTTATACTGTTTGGCTGCGGTGGCACTGCTGTGAGTGTGGCAGCATCGCACAAAGTATTTGACATGTTTTCCTTGATAACATTCCTCAAAAGTTTAAGCGCTGCTTGTTCTGGATCTGCTGAACTCATTGTCCCAGATTTTCACGCTGCACCAACCCTCTTCCCATCAAGACAGATGCCAGCTCTTGCACCATTTTGCAGTCCACGAAAGGTTAAAGCGATAAGTTTCGTGTTCACTGCATCAAAAATTCAAGAGCTCAAAACTATGGCTGTAAACTGCCTCAAGGAAGAAGGAGTCTCTAAGGTCAAGGCAAAGACTAGATAA 627 0.4226 MPQMRRNAIKMFTALSDHHHHHDSTHSYYSNSKLLQEALSETLTLFYPLVGRLQDDSTIACNDDGVVFTESKTNYLIYNEFNSINHRKAMQVANGPMIFFNFILFGCGGTAVSVAASHKVFDMFSLITFLKSLSAACSGSAELIVPDFHAAPTLFPSRQMPALAPFCSPRKVKAISFVFTASKIQELKTMAVNCLKEEGVSKVKAKTR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00245 208 Gene3D - 4 163 IPR023213 -
Pte4g00245 208 Pfam Transferase family 31 188 - -
Pte4g00245 208 PANTHER F21J9.9 25 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00245 Pte-Chr4 8220847 8223924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00245 27 164 Monolignol Biosynthesis Gene Families AT5G48930 29.605 5.48e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00245 - K13065 qsa:O6P43_014533 149.828