Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00240 ATGAAAAATAAACTTGGGTTCTTGGTGTTGTTCTTAGGATGCATTATCTGTTTGAATTACACTGTAGAATCTAAGTGCAGTTCGGGTTGTGCTTTAGCTTTAGCCTCTTTCTATGTCTGGTATGGCAGTAATCTCACACATATATCCAAGGTTATGCAGACAGATTCTGAGAAAATTTTAAGTTACAACAAGGGCAGGGTTCACAACAAAGAAAGCGTTCACGCCTTCATGAGAATCAATGTTCCGTTCAGATGTGACTGTATTGGTGGTGAATTTCTGGGTCATGTGTTCAACTACTCTGTTCACCCAGGGGATAATTACGATGTTGTTGCATCAAACGCATTTTCCAATTTGACAACACCTCAGTGGTTGCAGAAGTTCAATGCTAGATATACCCCTAAAAACTTCCCAGAGAAGAATGCATGGCTTAATGTGACGGTCAACTGTTCATGTGGGGATGCGTCGATTTCCAAAGACTCTGGCGTGTTTATTACATATCCTCTGAAGAGTACTGATAGCTTGGACTCCATCGCCAATGAGACTAAACTAGATCGGAATCTGCTTCAAAGATATAATCCCGGTGTCAATTTTAGCCAAGGCCATGGTCTGGTTTTTATTCCGGCCAAAGATCGAAATGGTATCTATTTACCCCTTAACACGAGTGCACGAGGTGCAAGCCTAAGTGCTGGTGCTATTGCTGGTATATCTATAGGAGCAGCAGGTGGGGTTCTTTTGTTGGTAGTTTGTGTGTATGCTGCTTTTCGCCGTATGAGGAAGATGATGCAAAAAAAGTTGCTCGCTCAAGAATCTAATGGTCGATCTGCTCGAGGTGGAGGAGTTCCCGGTAGCCCTGAATGTGAATCTTCCGTTTCTACTGGTCGTGGTGGTGCTAGCATTTCTAGTGTTGCAGGCATTGCCGTAGACAAATCTATGGTGTTCACATGCGATGAACTGGCTAAGGCTACAGATAACTTCAGTACGTCTCATAGGATTGGTCAAGGTGGTTTTGGGGCAGTCTACTATGCAGAGTTGAGAGGCGAGAGAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAGAGAATTCTTGGCTGAGTTGAAGGTCTTGACCCATGTGCATCACCTGAACCTGGTGCGCTTGATTGGCTACTGTGTTGAGGGGTCTCTTTTCCTTGTCTATGAGTACATTGAAAATGGGAACTTAAGTGAGCATTTGCGAGGTTCAGGGAGAGACCCACTGCCATGGTCAACAAGGGTGCAAATTGCTTTGGATTCAGCAAGAGGTCTTGAATATATTCACGAGCATACAGTACCTGTTTACATTCATCGCGATATCAAATCAGCAAATATATTGATAGACAAAAATTTCCATGGCAAGGTTGCTGATTTTGGCTTGACTAAACTGACTGAAGTTGGGAGCTCAGATCCCACTCGTCTTGTCGGAACCTTCGGATACATGCCACCAGAATATGCTCAATATGGTGAAGTCTCCCCCAAAATAGATATATATGCTTTCGGAGTAGTTCTCTATGAACTCATTTCTGCTAAGGAAGCAGTGGTGAAGACTGATGAGACTGCTAGTGAATCAAGGGGTCTCGTTGCTTTGTTTGAAGGAGTCCTTAATAAGCCTGACCCTCAAGAGGAACTCTGCAAATTGGTTGATCCTAGGCTGGGAAATAACTATCCAATTGAATCTGTTCACAAGATGGCTCAACTTGCCAGAACCTGCACTCAGGATAATCCTGATTTACGTCCGAGCATGAGGTCCATTGTTGTTGCTCTAATGACTCTTTCATCCAACAGTGAGGAGTGGGAGATTGGCTCCTATTATGACAATCAGACATTAATTAATCTCATGGCTGGAAGATAG 1869 0.435 MKNKLGFLVLFLGCIICLNYTVESKCSSGCALALASFYVWYGSNLTHISKVMQTDSEKILSYNKGRVHNKESVHAFMRINVPFRCDCIGGEFLGHVFNYSVHPGDNYDVVASNAFSNLTTPQWLQKFNARYTPKNFPEKNAWLNVTVNCSCGDASISKDSGVFITYPLKSTDSLDSIANETKLDRNLLQRYNPGVNFSQGHGLVFIPAKDRNGIYLPLNTSARGASLSAGAIAGISIGAAGGVLLLVVCVYAAFRRMRKMMQKKLLAQESNGRSARGGGVPGSPECESSVSTGRGGASISSVAGIAVDKSMVFTCDELAKATDNFSTSHRIGQGGFGAVYYAELRGERAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHGKVADFGLTKLTEVGSSDPTRLVGTFGYMPPEYAQYGEVSPKIDIYAFGVVLYELISAKEAVVKTDETASESRGLVALFEGVLNKPDPQEELCKLVDPRLGNNYPIESVHKMAQLARTCTQDNPDLRPSMRSIVVALMTLSSNSEEWEIGSYYDNQTLINLMAGR* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00240 622 Gene3D Phosphorylase Kinase; domain 1 304 395 - -
Pte4g00240 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Pte4g00240 622 FunFam LysM receptor kinase 2 304 395 - -
Pte4g00240 622 FunFam PTI1-like tyrosine-protein kinase 3 396 608 - -
Pte4g00240 622 MobiDBLite consensus disorder prediction 271 295 - -
Pte4g00240 622 Gene3D Transferase(Phosphotransferase) domain 1 396 615 - -
Pte4g00240 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 608 IPR044812 GO:0019199|GO:0045087
Pte4g00240 622 Pfam Protein tyrosine and serine/threonine kinase 327 593 IPR001245 GO:0004672|GO:0006468
Pte4g00240 622 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Pte4g00240 622 SMART serkin_6 325 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00240 622 ProSiteProfiles Protein kinase domain profile. 325 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00240 622 SUPERFAMILY Protein kinase-like (PK-like) 308 594 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00240 Pte-Chr4 7034263 7038661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00240 1 623 Receptor kinase-like Gene Family AT3G21630 55.259 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte4g00240 PK_Tyr_Ser-Thr 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00240 K13429 - qsa:O6P43_014568 856.67