Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00233 ATGTGCAAGAAGATGGCACCCGATACTACTGCTGCAACTGAGTTGAAGCCACATGGAATCACAGAAGAAGCAGGTGATAGCGTTGAAGATGGCGAAGATTTTTACATTCCACCTCTTAATTTTGCTAAGGTGGACAATGGCATTTTCAGGTCTGGCTTCCCTGAATTATCCAACTTCTCGTTTCTTCAGACTCTTGGCCTCCGCTCTGTCTTATGTCTCTGTCCAGAGCCGTACCCAGAGGGCAACATGGAGTTCCTCAAGTCCAATGGAATCAAGCTTTATCAATTTGGGATTGAAGGTCACAAGGAACCTTTTGTAAACATCCCTGAGGATATGATCCGTGAAGCACTGAAAGTTGTACTTGATGTTAGGAACCACCCCATTTTGGTTCACTGTAAAAGGGGAAAGCATCGAACTGGTTGCGTTGTGGGATGCCTGAGGAGGATGCAAAAATGGTGCCTTACTTCTGTGTTTGATGAATATCAGCGGTTTGCAGCTGCCAAGGCAAGAATTTCAGATCAGAGATTCATCGAGTTGTTTGATATTTCAAAACTGAAAAACTTCCCAATCACATTTTCATGCCAAAAAGATTTTCACCCATGCCATTGTGCTGATCTGGGGTCCTCCCTTGCATCATTGGAGACGACCTTTTAG 654 0.4434 MCKKMAPDTTAATELKPHGITEEAGDSVEDGEDFYIPPLNFAKVDNGIFRSGFPELSNFSFLQTLGLRSVLCLCPEPYPEGNMEFLKSNGIKLYQFGIEGHKEPFVNIPEDMIREALKVVLDVRNHPILVHCKRGKHRTGCVVGCLRRMQKWCLTSVFDEYQRFAAAKARISDQRFIELFDISKLKNFPITFSCQKDFHPCHCADLGSSLASLETTF* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00233 217 CDD PFA-DSP_Siw14 36 181 - -
Pte4g00233 217 MobiDBLite consensus disorder prediction 1 29 - -
Pte4g00233 217 PANTHER TYROSINE-PROTEIN PHOSPHATASE 35 186 - -
Pte4g00233 217 Pfam Tyrosine phosphatase family 35 186 IPR004861 -
Pte4g00233 217 Gene3D Protein tyrosine phosphatase superfamily 35 184 IPR029021 -
Pte4g00233 217 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 36 182 IPR029021 -
Pte4g00233 217 ProSitePatterns Tyrosine specific protein phosphatases active site. 130 140 IPR016130 GO:0016311|GO:0016791
Pte4g00233 217 PRINTS Plant and fungal dual specificity phosphatase signature 72 85 IPR020428 GO:0016791
Pte4g00233 217 PRINTS Plant and fungal dual specificity phosphatase signature 108 122 IPR020428 GO:0016791
Pte4g00233 217 PRINTS Plant and fungal dual specificity phosphatase signature 35 52 IPR020428 GO:0016791
Pte4g00233 217 PRINTS Plant and fungal dual specificity phosphatase signature 91 105 IPR020428 GO:0016791
Pte4g00233 217 ProSiteProfiles Dual specificity protein phosphatase domain profile. 40 194 IPR020422 GO:0006470|GO:0008138
Pte4g00233 217 FunFam probable tyrosine-protein phosphatase At1g05000 34 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00233 Pte-Chr4 6926149 6928689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00233 23 198 Protein tyrosine phosphatase (PTP) family AT4G03960 67.416 1.37e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00233 K18045 - qsa:O6P43_020789 315.849