Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00232 ATGGCAGAATCAAAAACTTCAATAGTCACGAGGGAATTCATCAAACCTTCCATTCAAACTCCTACGAGTCTCAAAACCTTCAAACTATCCCTGTTAGATCAAATCACTCCTGACCTTCATGCCAATGTCAGCTTCTTCTACCTCCCTTCCAAATCCAAATCTTCTGAATCAAATTCTTCTCATGCCGAGTCAGATTTTTCAGCCAAATCGCAACATTTGAAAGATTCAATATCTCGAACACTCACTCGCTTCTACCCTTTTGCTGGTCGTTTCCTAGATGATTGCACTGTTGATTGTAACGATGAAGGTATCCTCTTCATTGAAGCTCAATCTGACATCTCTCTCGAGCATTTTCTCCATCATCCTGACTTGGCTGTTGTAGACAACGATATTCTTCCCTCTCCGAACTTGGAAGCGAGTGAACTATCTCATGGTTCCCTGCTAGTATTGAAGTTTGTCTCATTTCAATGTGGGGGTTGTGCCTTAGGTGTCACTAACTCACATAAGATCGGTGACTTGCAATCACTAGTCACATTTCTCCAAAGTCTAAGCCTCGAGTGTAGAGGAGTCATGAACCCGCTTTTACCTGATTTCATTACTGGCCCCTCTCTTCTACCTGCAAGAGAGATCCCTAGTGTTGAAACCTCTGCGATCATTTCCTCTAAGAAGTTTGCACCAAGAAGGCTTGTCTTTCGGGCCTCTAAGATTAGAGAGCTCAAAGCCAAAATTTTGAGTGCTCTCAAGAAAGAGGGAAAAGAATTTCAGCCTTCACGAGTTGAAGTGGTGGAAGCCTTAATTGGGAAAAGTGTTATGGCCGCATACAAGTCTAGGACTCGTGCATTTAGGCCCTTAGCATTGGTTCAAGCAACCAACATCAGAACCAGAAAATCCCCACCACTACCTCACAATGCTATTGGAAACTTGATGTGGATGTATCCAGTCATAGTAGAGGAGGAGAGTCAGATGGACATAGTTGAGTTGGTGAAAAAGTTGAGGGAAATGAAAGATTCACTTAATGACAAGGCATCCAAACTCAACGACGAAGACATAGCTGGGGTTGTGCAACAATTTCAAAAAGATAGAGAGAACCATCTGAAGAATTTGGAAGCGATTATTTTCTCTAGCTTTTGTAGTTATCCATTGTCTGAAATTGACCTGGGATGGGGAAATCCAGAGTGGATAACCAGCATAGGAAGGAACCTCATGACGAATACTACTTATTTGTTGAACAGTACAAAGGAAAAGGGAGGGGTCGAAGCTGTGGTGCATCTAAGCGAAGAATATATGAATTTTCTTGCAAGCGATAGGGAGCTTCTTCCATATGCTGCCATTCTTGGAAGCGCTCTCTGA 1350 0.4267 MAESKTSIVTREFIKPSIQTPTSLKTFKLSLLDQITPDLHANVSFFYLPSKSKSSESNSSHAESDFSAKSQHLKDSISRTLTRFYPFAGRFLDDCTVDCNDEGILFIEAQSDISLEHFLHHPDLAVVDNDILPSPNLEASELSHGSLLVLKFVSFQCGGCALGVTNSHKIGDLQSLVTFLQSLSLECRGVMNPLLPDFITGPSLLPAREIPSVETSAIISSKKFAPRRLVFRASKIRELKAKILSALKKEGKEFQPSRVEVVEALIGKSVMAAYKSRTRAFRPLALVQATNIRTRKSPPLPHNAIGNLMWMYPVIVEEESQMDIVELVKKLREMKDSLNDKASKLNDEDIAGVVQQFQKDRENHLKNLEAIIFSSFCSYPLSEIDLGWGNPEWITSIGRNLMTNTTYLLNSTKEKGGVEAVVHLSEEYMNFLASDRELLPYAAILGSAL* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00232 449 Pfam Transferase family 8 438 - -
Pte4g00232 449 Gene3D - 222 439 IPR023213 -
Pte4g00232 449 PANTHER F21J9.9 7 440 - -
Pte4g00232 449 SUPERFAMILY CoA-dependent acyltransferases 231 340 - -
Pte4g00232 449 Coils Coil 328 348 - -
Pte4g00232 449 Gene3D - 4 214 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00232 Pte-Chr4 6852474 6853823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00232 5 432 Monolignol Biosynthesis Gene Families AT5G48930 25.054 1.27e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00232 - - qsa:O6P43_014533 437.573