Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00230 ATGGCAGAATCAAAAACTTCAATAGTCACGAGGGAATTCATCAAACCTTCCATTCAAACTCCTACGAGGTCTCAAAACCTTCAAACTGTCCCTGTTAGATCAAAATCACTCCTGACCTTCATGCCAATGTCAACTTCTTCTACCTCCCTTCCAAATCCAAATCTTCTGACTCAAATTCTTCTCATGCTGAGTCAGATTTTTCTAGCCAAATCGCAACATTTGAAAGATTCAATCTCTCGAACACTCACTCGCTTCTACCCTTTTGCTGGTCGTTTCCTAGATGACTGCACTGTTGATTGTAATGATGAAGGTATCCTCTTCATTGAAGCTCAATCTGACATCTCTCTCGAGCATTTTCTCCATCATCCTGACTTGGCTGTTGTAGACAACGATATTCTTCCCTCTTCGAACTTGGAAGCGAGTGAACTATCTCATGGTTCCCTGCTAGTATTGAAGTTTATCTCATTCCAATGTGGGGGTTGTGCCTTAGGTGTCACTATCTCACATAAGATCGGTGACTTGCAATCACTAGCCACATTTCTCCAAAGTCTAAGCCTCGAGTGTAGAGGAGTCATGAACCCGCTTTTACCTGATTTCATCACTGGCCCCTCTCTTCTACCTGCAAGAGAGATCCCTAGTGTTGAAACCTCTGCGATCATTTCCTCTAAGAAGTTAGTACCAAGAAGGCTTGTCTTTCGGGCCTCCAAGATCAGAGAGCTCAAAGCCAAAATTTTGAGTGCTCTCGAGAAAGAGGGAAAAGAATTTCAGCCTTCAAGAGTTGAAGTGGTGGAAGCCTTAATTGGGAAAAGTGTTATGGCCGCAAACAAGTCTAGGACTCGTGCATTTAGGCCCTTAGCATTGGTTCAAGCAACCAACATCAGAACCAGAAAATCCCCACCAGTACCTCACAATGCTATTGGAAACTTGATGTGGATGTATCCAGTCATAGTAGAGGAGGAGAGTCAGATGGACATAGTTGAGTTGGTGAAAAAGTTGAGGGAAATGAAAGATTCACTTAATGACAAGGCAACCAAATTCAACTGCGAAGACATAGCTGGGGTTGTGCAACAATCTCAAAAAGATAGAGAGAACCATCTGAGGAACTTGGAAGTGATGATTTTCTCTAGCTTTTGTAATTATCCGTTGTCTGAAATTGACTTGGGATGGGGAAATCCAGAGTGGATAACCAGCACAGGAAGGAACCTCATGACGAATACTTTTTATTTGTTGGACAGTACAAAGGAAAAGGGAGGGGTCGAAGCTGTGGTGCATCTAAGCGAAGAAGATATGAATTTTCTTGCATGCGATAGGGAGCTTCTTCCATATGCTGACATTATTGGAAGCGCACTGATAACTTGA 1359 0.4283 MAESKTSIVTREFIKPSIQTPTRSQNLQTVPVRSKSLLTFMPMSTSSTSLPNPNLLTQILLMLSQIFLAKSQHLKDSISRTLTRFYPFAGRFLDDCTVDCNDEGILFIEAQSDISLEHFLHHPDLAVVDNDILPSSNLEASELSHGSLLVLKFISFQCGGCALGVTISHKIGDLQSLATFLQSLSLECRGVMNPLLPDFITGPSLLPAREIPSVETSAIISSKKLVPRRLVFRASKIRELKAKILSALEKEGKEFQPSRVEVVEALIGKSVMAANKSRTRAFRPLALVQATNIRTRKSPPVPHNAIGNLMWMYPVIVEEESQMDIVELVKKLREMKDSLNDKATKFNCEDIAGVVQQSQKDRENHLRNLEVMIFSSFCNYPLSEIDLGWGNPEWITSTGRNLMTNTFYLLDSTKEKGGVEAVVHLSEEDMNFLACDRELLPYADIIGSALIT* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00230 452 Gene3D - 222 440 IPR023213 -
Pte4g00230 452 Pfam Transferase family 69 438 - -
Pte4g00230 452 Coils Coil 329 349 - -
Pte4g00230 452 Gene3D - 4 215 IPR023213 -
Pte4g00230 452 SUPERFAMILY CoA-dependent acyltransferases 235 342 - -
Pte4g00230 452 PANTHER F21J9.9 7 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00230 Pte-Chr4 6646747 6648105 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00230 72 433 Monolignol Biosynthesis Gene Families AT5G48930 26.131 1.98e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00230 - - qsa:O6P43_014533 382.874