Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00229 ATGTATAGTATAAATGGACGCAATCTGCAGTCATTCAAACACAAATCGTTGTCACTGAAGGAAGAACAAGCTCTGCACACAAACATGGCAGAATCAAAAACTTCAATAGTCACGAGGGAATTCATCAAACCTTCCATTCAAACTCCTACGAGTCTCAAAACCTTCAAACTGTCCCTGTTAGATCAAATCACTCCTGACCTTCATGCCAATGTCAGCTTCTTCTACCTCCCTTCCAAATCCAAATCTTCTGACTCAAATTCTTCTCATGCCGAGTCAGATTTTTCTGCCAAATCGCAACATTTGAAAGATTCAATCTCTCGAACACTCACTCGCTTCTACCCTTTTGCTGGTCGTTTCCTAGATGACTGCACTGTTGATTGTAATGATGAAGGTATCCTCTTCATTGAAGCTCAATCTGACATCTCTCTCGAGCATTTTCTCCATCATCCTGACTTGGCTGTTGTAGACAACGATATTCTTCCCTCTTCGAACTTGGAAGCGAGTGAACTATCTCATGGTTCCCTGCTAGTATTGAAGTTTATCTCATTCCAATGTGGGGGTTGTGCCTTAGGTGTCACTATCTCACATAAGATCGGTGACTTGCAATCACTAGCCACATTTCTCCAAAGTCTAAGCCTCGAGTGTAGAGGAGTCATGAACCCGCTTTTACCTGATTTCATCACTGGCCCCTCTCTTCTACCTGCAAGAGAGATCCCTAGTGTTGAAACCTCTGCGATCATTTCCTCTAAGAAGTTAGCACCAAGAAGGCTTGTCTTTCGGGCCTCCAAGATTAGAGAGCTCAAAGCCAAAATTTTTAGTGCTCTCGAGAAAGAGGGAAAAGAATTTCAGCCTTCAAGAGTTGAAGTGGTGGAAGCCTTAATTGGGAAAAGTGTTATGGCCGCAAACAAGTCTAGGACTCGTGCATTTAGGCCCTTAGCATTGGTTCAAGCAACCAACATCAGAACCAGAAAATCCCCACCAGTACCTCACAATGCTATTGGAAACTTGATGTGGATGTATCCAGTCATAGTAGAGGAGGAGAGTCAGATGGACATAGTTGAGTTGGTGAAAAAGTTGAGGGAAATGAAAGATTCACTTAATGACAAGGCAACCAAATTCAACTGCGAAGACATAGCTGGGCTTGTGCAACAATCTCAAAAAGATAGACAGAACCATCTGAGGAATTTGGAAGTGATGATTTTCTCTAGCTTTTGTAATTATCCGTTGTCTGAAATTGACTTGGGATGGGGAAATCCAGAGTGGATAACCAGCACAGGAAGGAACCTCATGACGAATACTTTTTATTTGTTGGACAGTACAAAGGAAAAGGGAGGGGTCGAAGCTGTGGTGCATCTAAGCGAAGAAGATATGAATTTTCTTGCATGCGATAGGGAGCTTCTTCCATATGCTGACATTATTGGAAGCGCACTGATAACTTGA 1440 0.4264 MYSINGRNLQSFKHKSLSLKEEQALHTNMAESKTSIVTREFIKPSIQTPTSLKTFKLSLLDQITPDLHANVSFFYLPSKSKSSDSNSSHAESDFSAKSQHLKDSISRTLTRFYPFAGRFLDDCTVDCNDEGILFIEAQSDISLEHFLHHPDLAVVDNDILPSSNLEASELSHGSLLVLKFISFQCGGCALGVTISHKIGDLQSLATFLQSLSLECRGVMNPLLPDFITGPSLLPAREIPSVETSAIISSKKLAPRRLVFRASKIRELKAKIFSALEKEGKEFQPSRVEVVEALIGKSVMAANKSRTRAFRPLALVQATNIRTRKSPPVPHNAIGNLMWMYPVIVEEESQMDIVELVKKLREMKDSLNDKATKFNCEDIAGLVQQSQKDRQNHLRNLEVMIFSSFCNYPLSEIDLGWGNPEWITSTGRNLMTNTFYLLDSTKEKGGVEAVVHLSEEDMNFLACDRELLPYADIIGSALIT* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00229 479 Gene3D - 32 242 IPR023213 -
Pte4g00229 479 SUPERFAMILY CoA-dependent acyltransferases 261 370 - -
Pte4g00229 479 Coils Coil 356 376 - -
Pte4g00229 479 Pfam Transferase family 36 465 - -
Pte4g00229 479 Gene3D - 250 467 IPR023213 -
Pte4g00229 479 PANTHER F21J9.9 35 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00229 Pte-Chr4 6632968 6634407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00229 33 460 Monolignol Biosynthesis Gene Families AT5G48930 25.431 8.14e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00229 - - qsa:O6P43_014533 437.573