Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00226 ATGGCTCAAGGAGAGACTAAGATATTGTCAAAAACTATCACCAAGCCTTCGATTCCAACACCCCACCAACTCGAGACCCACAAAGTCTGTCTCCTAGATCAACTTTCTCCTAATCTCCATAATATTCTGACCATTTTTTACCATAACAACGTAACTGGTTCCAATGGCAACTGCATATCAACATTCTCTGCAAGATCTCAGCTTCTTCAGAATTCACTCTCTCAGACTCTCTCACGCTTCTACCCCTTTGCTGGCCGATTCAAAGATGATGCCACTATCCTTTGCAACGACGATGGTGTTGTCTTCTTTGAAGCCAAGACTGAGATTCGTCTCCGAGATATCCTCTCCCATCCTGACTTGGACACTATAGGCTCTCACTACCTTTATGCTACTGACGACTTCAAAAACAGTAAACAATTACAACGTCCCATGATACTGGTTGGATTCACCTTGTATGGATGTGGAGGCACTGCCTTGAGCATTTGTATCACACACAAGATTGCTGACTTGGCATCATTGCTCACACTATTGCAGAGCTGGACCGCTGCTTGTAGAGGCACCAAGGAAACAGTTTTACCGAACTTGAACATAGCAGCCTCAATCATACATCCCAGAGAAATCTCTAGCATATCAGAATCTGTGGTACTGAGTACCAAGAAGTTTGCTTCAAGGAGGTTTGTCTTCAACGCAACCAAGATTGCGGAGCTCAAAGCAAAGGTGCTGAGTGGAATAGGTGGTGAGTTGAAGCACTACCCTTCACGAGCTGAGATTGTGATGGCGCTTATATGGAAATGTGCTATGGCAGCTTTTGTATATAAAACGGGAAAGTTTAAGCCAACAGTTCTTATGCAAGCTGCAAACCTGAGATCCCGAATGGATCCACCACTACCTGAAAATTCAATGGGGAATTTGGCTTGGCTATTTCCAATGATAATTGAGAAAGAGAGTGAAATGGAAATGAAAGAGTTGGTAAAGAAGATGATAGTTATGAAAACATCACTTAGGAACAAAGCGAACAAATTCAGTAGTGAAAACATTGTTGAACGAGTGAAGGAGGGACTGCAAGAAAGAGAACAACTAATTAAAAACGACAAGGATCTTGTTGTTTATCTCTGTGCCAGTTGGTGTAAGTTTCCAATGCTTGAACTTGATTTTGGTTGGGGAAAGCCAGTGTGGGTGACTAGTATTGATAAAGCTAATCTCATGGGGAATACCATACATTTACTTGATACAAGAGTAGCTGGTGAAGTCGAGGCATTGATACATCTCGAGGAAGATGAGATGGATATGTTCCAACAAAATTCGGAGCTGCTTCAGTATGCTTCCATTAACCCTAGTATTATTTGA 1347 0.4217 MAQGETKILSKTITKPSIPTPHQLETHKVCLLDQLSPNLHNILTIFYHNNVTGSNGNCISTFSARSQLLQNSLSQTLSRFYPFAGRFKDDATILCNDDGVVFFEAKTEIRLRDILSHPDLDTIGSHYLYATDDFKNSKQLQRPMILVGFTLYGCGGTALSICITHKIADLASLLTLLQSWTAACRGTKETVLPNLNIAASIIHPREISSISESVVLSTKKFASRRFVFNATKIAELKAKVLSGIGGELKHYPSRAEIVMALIWKCAMAAFVYKTGKFKPTVLMQAANLRSRMDPPLPENSMGNLAWLFPMIIEKESEMEMKELVKKMIVMKTSLRNKANKFSSENIVERVKEGLQEREQLIKNDKDLVVYLCASWCKFPMLELDFGWGKPVWVTSIDKANLMGNTIHLLDTRVAGEVEALIHLEEDEMDMFQQNSELLQYASINPSII* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00226 448 Pfam Transferase family 8 437 - -
Pte4g00226 448 Gene3D - 218 442 IPR023213 -
Pte4g00226 448 Gene3D - 5 213 IPR023213 -
Pte4g00226 448 PANTHER F21J9.9 7 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00226 Pte-Chr4 6120374 6122026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00226 8 433 Monolignol Biosynthesis Gene Families AT5G48930 23.542 6.61e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00226 - - qsa:O6P43_014533 429.869