Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00224 ATGACAGAACCAAAGACAGTTGTCATCTCAAGGAAATTCATCAAACCTTCATCTGAAACTCCTTCAAACCTCAAAACCTTCAAGCTCTCTCTCTTAGATCAAATGACCCCAGACCTTCATTTCAATACTACTTTCTTCTACCACCCTCCCAAATCATCTGATGACATAATTGCTACTGTTCCCGATTCAGACTTTGCAAAATCAAAACAGCTACAGAACTCACTGTCTCGCACACTTCGTCACTTCTACCCTTATGCAGGTCGTTTCCAAGATGATAGCACTGTTGATTGTAACGATGAAGGCATCTTCTTCATTGAAGCTCATTCTGAAATGTCTCTTACAAATTTCCTACAAAGTCCTAACTTACGCATTGTAGACGAAGACTTTCTCCCTAGTATTGAGTCTGAAACAAATGAATCATTTCGAGGTCCGATGCTACTCATCAAGTTTATCGTATTCAGTTGTGGTGGTTGTGTCTTGAGCCTCTCTATTTCACATAAGATAGCTGACATGGTATCATTGGCAACTTTTATGCAAAACCTATGCCTTGAATGTCTTGGAATCCCCAGCCAACTACTGCCTGATTTCCCAACCTCCCCTACTCTTCTTCCTGCAAGAGATATACCTAATGTCAAAACCAATGCGATCATATCACCAAAGAAGTTCGCTACTATAAGGCTTGGTTTTCATGCTTCGAGAATTGTAAAGCTCAAAGCCAAGATCTTTAGCGCCCTGAATAAAGATGGCAAAGAATTATTTCACCCATCAACAGTGGAGGTGGTGGAAGCTTTAATCTTCAAATGTATAGTGGCTGCATGCAAGTGTAAAACAGGTTTATTTAGGCCCTCGGTGTTGGCCCAAGCTGTAAACCTCCGAACCAGAATAAACCCACCACAGCCTCAAAGTGCTATGGGAAACTTGATGTGGATGTTTCCTATCATAGTGGAAAATGAGAGTGAGATGGAAATGGTTGAGCTGGTGAAAAAATTGAGGGCCATGAAAGATTCCCTCAAGGATAAGGTAGCCAAATTCAATAGTGAAGAAATTGGTGGGGTCGTTCAACAATTTCTTAGAGATAGAGCGGAGCATTTGCAGGATTTAGAACCATGCATTTTCTCTAGTTGGTGCAAATTTCCACTCTTAGAAATGGACTTGGGATGGGGGAAACCGGTTTGGGTGACTAGCATAGCAAAGAACCTAATGGCAAACACTGTTTACTTAATGGATACAAAGGAAGTTGGAGGTGTTGAAGCTTTAGTGCACTTGGGTGAAGAAGAAATGAACTCTTTTGGAGCCAATGAAGAACTTCTTTGTTATGCTGCCGTTAATCCCAGTGTAATTTGA 1344 0.4115 MTEPKTVVISRKFIKPSSETPSNLKTFKLSLLDQMTPDLHFNTTFFYHPPKSSDDIIATVPDSDFAKSKQLQNSLSRTLRHFYPYAGRFQDDSTVDCNDEGIFFIEAHSEMSLTNFLQSPNLRIVDEDFLPSIESETNESFRGPMLLIKFIVFSCGGCVLSLSISHKIADMVSLATFMQNLCLECLGIPSQLLPDFPTSPTLLPARDIPNVKTNAIISPKKFATIRLGFHASRIVKLKAKIFSALNKDGKELFHPSTVEVVEALIFKCIVAACKCKTGLFRPSVLAQAVNLRTRINPPQPQSAMGNLMWMFPIIVENESEMEMVELVKKLRAMKDSLKDKVAKFNSEEIGGVVQQFLRDRAEHLQDLEPCIFSSWCKFPLLEMDLGWGKPVWVTSIAKNLMANTVYLMDTKEVGGVEALVHLGEEEMNSFGANEELLCYAAVNPSVI* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00224 447 Pfam Transferase family 8 436 - -
Pte4g00224 447 Coils Coil 327 347 - -
Pte4g00224 447 PANTHER F21J9.9 8 433 - -
Pte4g00224 447 Gene3D - 220 438 IPR023213 -
Pte4g00224 447 Gene3D - 5 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00224 Pte-Chr4 6114424 6116043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00224 14 430 Monolignol Biosynthesis Gene Families AT5G48930 22.940 1.94e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00224 - - qsa:O6P43_014533 452.981