Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00223 ATGGCGTCAAAGAACCCAGAGATCATATCCATAACCAAAATCAAGCCTTCCTCATCCACCCCACTTCACCTTCAAACCTTCAAGCTCTCACTTCTAGACCAGGTAGCCCATCATGTCTATTCTAATATGAACTGGTTCTATTCTCATGGCAACGGTACCTCAAACAATGGTACTGATGATAATCATCATGGTGATTATACTAGCCTCTTCTTTTCCAGGTCCAATCTTCTGAAAAAATCTCTTTCTGAAACGCTAACAGTCTTCTACCCTTTGGCTGGTAGATTACAAGATGACAGCACAATCACCTGCAACGATGAAGGTGTGGTCTTCATCGAGTCCAAAACCGATTTTCTTCTTTCAGAAATTTTGACATGTCCTGACTTTGGCCTCATATATAGCACTTGTGTACCAACTAATTACCAAGCAGCCATGGAAATATCTAATGGATCTCTGCTACTCTTCAATTGTCTACTGTTTCGACGTGGTGGCATGGCAGTGAACATTACAGCATCACACAAAATACTTGACTTGGCATCTTTGATGACATTCCTCAAAAGTTTAACTGCAGCTTGTTGTGGATATGCACAACCAATTGCTCCAGATTTTCACACTGCACCATCCCTCTTCCCCTCAAGAGAGATGCCAAAAGCTGACACACCCTTTATTAATCTACGCAAGAGCAGTATGAAAAGCTTTGTGTTCACAGCATCCAAAGTTCAAGAGCTGAAGACTATTGCAGCAAACAGCCTTAAGCAAGAAGGATATGAATTTGGTTACCTTTCTCGTGTGAATGTGGTAATGGCGTTCCTTTGGAAATGTCTTCTGACAACTTCCATATCACAAAAAGGGTTCTTCAGGCCGACAGTTATGATTCAAGCAGCGAATCTCCGAAACCGAATAGAACCATCTATACCACAAAATGCTATGGGGGTTCTTTCGTTCTTGTTCCCCATTTTAGTTGAAAAGGAAAGTGATGTCAGCATGATTGAGTTGCTGAAGAAGCTGATGGAGTTGAAAGTTTCAGTTGATGAAAAAGCCAAAAGGTTCAAAGGAGAAGAAGTGGTTCGAGTACTGGCTGAAGAAACTAAAGATATACAAGATTTCTTTAATGAGAAAGATAATTTGGCACTTTACATTGGCTCAAGCTGGTGCAGATTTGAAATGTATGACATTGATTTTGGATTTGGTAAGCCATTTTGGATTACTAGTGTAACGAATGAACATTTGGCAAGTTCAATCAATTTGATGGACACAAAAGAGGTTGGCGGAGTTGAAGCTTTAGTGTACTTAGATGAAGAAGAGATGACAGTATTTGAAAGCAACCAGGCACTGCTGAACTTTGCTGTGCTCAAGAGGAATGTTTTCTGA 1368 0.405 MASKNPEIISITKIKPSSSTPLHLQTFKLSLLDQVAHHVYSNMNWFYSHGNGTSNNGTDDNHHGDYTSLFFSRSNLLKKSLSETLTVFYPLAGRLQDDSTITCNDEGVVFIESKTDFLLSEILTCPDFGLIYSTCVPTNYQAAMEISNGSLLLFNCLLFRRGGMAVNITASHKILDLASLMTFLKSLTAACCGYAQPIAPDFHTAPSLFPSREMPKADTPFINLRKSSMKSFVFTASKVQELKTIAANSLKQEGYEFGYLSRVNVVMAFLWKCLLTTSISQKGFFRPTVMIQAANLRNRIEPSIPQNAMGVLSFLFPILVEKESDVSMIELLKKLMELKVSVDEKAKRFKGEEVVRVLAEETKDIQDFFNEKDNLALYIGSSWCRFEMYDIDFGFGKPFWITSVTNEHLASSINLMDTKEVGGVEALVYLDEEEMTVFESNQALLNFAVLKRNVF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00223 455 Pfam Transferase family 7 443 - -
Pte4g00223 455 Gene3D - 225 447 IPR023213 -
Pte4g00223 455 Gene3D - 6 219 IPR023213 -
Pte4g00223 455 PANTHER F21J9.9 7 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00223 Pte-Chr4 5890682 5892291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00223 12 439 Monolignol Biosynthesis Gene Families AT5G48930 22.318 2.36e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00223 - - qsa:O6P43_014533 364.385