Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00222 ATGACAGAACCAAAGACAGTTGTCATCTCAAGGAAATTCATCAAACCTTCATCTGAAACTCCTTCAAACCTCAAAACCTTCAAGCTCTCTCTCTTAGATCAAATGACCCCAGACCTTCATTTCAATACTACTTTCTTCTACCACCCTCCCAAATCATCTGATGACATAATTGCTACTGTTCCCGATTCAGACTTTGCAAAATCAAAACAGCTACAGAACTCACTGTCTCGCACACTTCGTCACTTCTACCCTTATGCAGGTCGTTTCCAAGATGATAGCACTGTTGATTGTAATGATGAAGGCATCTTCTTCACTGAAGCTCATTCTGAAATGTCTCTTACAAATTTCCTACAAAGTCCTAACTTACGCATTGTAGACGAAGACTTTCTCCCTAGTATTGAGTCTGAAACAAATGAATCATTTCGAGGTCCGATGCTACTCATCAAGTTGATCGTATTCAGTTGTGATGGTTGTGCCTTGAGCCTCTCTATTTCACATAAGATTGCTGACTTGGTATCATTGGCAACTTTTATGCAAAACCTATGCCTTGAATGTCTTGGAATCCCCAGCCAACTACTGCCTGATTTCCTAACCTCCCCTACTCTTCTTCCTGCAAAAGATATACCTAATGTCAAAACCAATGCGATCATATCACCAAAGAAGTTCGCTACTATAAGGCTTGGTTTTCATGCTTCGAGAATTGTAAAGCTCAAAGCCAAGATCTTTAGCGCCCTGAATAAAGATGGCAAAGAATTATTTCACCCATCAACAGTGGAGGTGGTGGAAGCTTTAATCTTCAAATGTATAGTGGCTGCATGCAAGTGTAAAACAGGTTTATTTAGGCCCTCAGTGTTGGCCCAAGCTGTAAACCTCCGAATCAGATTAAACCCACCACAGCCTCAGAGTGCTATGGGAAACTTGATGTGGATGTTTCCTATCATAGTGGAAAATGAGAGTGAGATGGAAATGGTTGAGCTGGTGAAAAAATTGAGGGCCATGAAAGATTCCCTCAAGGATAAGGTAGCCAAATTCAATAGTGAAGAAATTGATGGGGTCGTTCAAAAATTTCTTAGAGATAGAGCGGAGCATTTGCATTTAGAACTATGCATTTTCTCTAGTTGGTGCAAATTTCCACTCTTAGAAATGGACTTGGGATGGGGGAAACCGGTTTGGGTGACTAGCATAGCAAAGAACCTAATGGCAAACACTGTTTACTTAATGGATACAAAGGAAGTTGGAGGTGTTGAAGCTTTGGTGCACTTGGGTGAAGAAGAAATGAACTCTTTTGGAGCCAATGAAGAACTTCTTTGTTATGCTGCCGTTAATCCCAGTGTAATTTGA 1341 0.4079 MTEPKTVVISRKFIKPSSETPSNLKTFKLSLLDQMTPDLHFNTTFFYHPPKSSDDIIATVPDSDFAKSKQLQNSLSRTLRHFYPYAGRFQDDSTVDCNDEGIFFTEAHSEMSLTNFLQSPNLRIVDEDFLPSIESETNESFRGPMLLIKLIVFSCDGCALSLSISHKIADLVSLATFMQNLCLECLGIPSQLLPDFLTSPTLLPAKDIPNVKTNAIISPKKFATIRLGFHASRIVKLKAKIFSALNKDGKELFHPSTVEVVEALIFKCIVAACKCKTGLFRPSVLAQAVNLRIRLNPPQPQSAMGNLMWMFPIIVENESEMEMVELVKKLRAMKDSLKDKVAKFNSEEIDGVVQKFLRDRAEHLHLELCIFSSWCKFPLLEMDLGWGKPVWVTSIAKNLMANTVYLMDTKEVGGVEALVHLGEEEMNSFGANEELLCYAAVNPSVI* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00222 446 PANTHER F21J9.9 8 432 - -
Pte4g00222 446 Coils Coil 327 347 - -
Pte4g00222 446 Gene3D - 220 437 IPR023213 -
Pte4g00222 446 Gene3D - 5 213 IPR023213 -
Pte4g00222 446 Pfam Transferase family 8 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00222 Pte-Chr4 5758917 5760496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00222 14 429 Monolignol Biosynthesis Gene Families AT5G48930 23.163 1.41e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00222 - - qsa:O6P43_014533 448.743