Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00220 ATGGCGTCAAAGAACACAGAGATCATATCCATAACCACCATTAAGCCTTCCTCATCCACCCCACTTCACCTTCAAACCTTTAAACTCTCACTTCTAGACCAGGTTGCCCATCATGTCTATTCTAATATGAACTTCTTCTATTCTTATGGCAACGGTACCTCAATCAATGGTACTGATGATAATCATCATGGTGATTATACTAGCCTCTTCTTTTCCAGGTCTAATCTTCTGAAAAAATCTCTTTCTAAAACTCTAACAGTCTTCTACCCTTTGGCTGGTAGATTACAAGATGACAGCACAATCACCTGCAACGATGAAGGTGTGGTCTTCATCGAGTCCAAAACCGATTTTCTTCTTTCAGACATTTTGACATGTCCTGACTTTGGCCTTATATATAGCAGTTGTGTACCAACTAATTACCAAGCAGCCATGGAAATGTCTAATGGATCTCTGCTACTCTTCAATTGTTTACTGTTTCGATGTGGTGGCATTGCAGTGAGCATTGCAGCATCACACAAAATACTTGACTTGGCATCTTTCATGACGTTCCTCAAAAGTTTAACTGCAGCTTGTTGTGGATATGCACAACCAATTGCTCCAGATTTTCACACTGCACCATCCCTCTTCCCCTCAAGAGAGATGCCAAAAGCTGACACACCCTTTATTAATCTACGCAAGAGCAGTATGAAAAGCTTTGTGTTCACTGCATCCAAAGTTCAAGAGCTGAAGACTATTGCAGCAAACAGCCTTAAGCAAGAAGGATATGAATTTGGTTACCTTTCTCGTGTGAATGTGGTAATGGCGTTCCTTTGGAAATGTCTTCTGACAACTTCCATATCACAAAAAGGGTTCTTCAGGCCGACAGTTATGATTCAAGCAGCGAATCTCCGAAACCGAATAGAACCATCTATACCACAAAATGCTATGGGGGTCCTTTCGTTCTTGTTCCCAATTTTAGTTGAAAAGGAAAGTGATGTCAGCATGATTGAGTTGCTGAAGAAGCTGATGGAGTTGAAAGTTTCAGTGGATGAAAAAGCCAAAAGGTTCAAAGGAGAAGAAGTGGTTCGAGTACTGGCTGAAGAAACCAAAGATATACAAGATTTCTTAAATGAGAAAGATAATTTGGCCCTTTACATTGGCTCAAGCTGGTGCAGATTTGAACTGTATGACATTGATTTTGGATTTGGTAAGCCATTTTGGATTACAAGTGTAACGAATGAACACTTGGCAAGTTCAATCAATTTGATGGACACAAAAGAGGTTGGCGGAGTTGAAGCTTTTATGTACTTAGATGAAGAAGAGATGACAGTATTTGAAAGCAACCAGGCACTGCTGAACTTTGCTGTGCTCAAGAGGAATGTTTTCTGA 1368 0.4035 MASKNTEIISITTIKPSSSTPLHLQTFKLSLLDQVAHHVYSNMNFFYSYGNGTSINGTDDNHHGDYTSLFFSRSNLLKKSLSKTLTVFYPLAGRLQDDSTITCNDEGVVFIESKTDFLLSDILTCPDFGLIYSSCVPTNYQAAMEMSNGSLLLFNCLLFRCGGIAVSIAASHKILDLASFMTFLKSLTAACCGYAQPIAPDFHTAPSLFPSREMPKADTPFINLRKSSMKSFVFTASKVQELKTIAANSLKQEGYEFGYLSRVNVVMAFLWKCLLTTSISQKGFFRPTVMIQAANLRNRIEPSIPQNAMGVLSFLFPILVEKESDVSMIELLKKLMELKVSVDEKAKRFKGEEVVRVLAEETKDIQDFLNEKDNLALYIGSSWCRFELYDIDFGFGKPFWITSVTNEHLASSINLMDTKEVGGVEAFMYLDEEEMTVFESNQALLNFAVLKRNVF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00220 455 PANTHER F21J9.9 7 448 - -
Pte4g00220 455 Gene3D - 4 219 IPR023213 -
Pte4g00220 455 Gene3D - 225 447 IPR023213 -
Pte4g00220 455 Pfam Transferase family 7 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00220 Pte-Chr4 5706930 5708337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00220 71 439 Monolignol Biosynthesis Gene Families AT5G48930 23.913 5.63e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00220 - - qsa:O6P43_014533 365.54