Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00212 ATGGTGGTCGGTGCTCTGATGACAAAGAGCAAATCTTGCCCTAATTACCTAATGACAGACACAAAGCAGCTTCATGGTCCTGATGAAGGCAAAAGCAGACGGAACAACTCAGGCCAGCTCGCCCCTCAAGTTTGCTTCTCAGTGTACGTTGGACCCCAGAGACAGAGGTTTGTGATCAAAACGAGGTATGCGAACCACCCGTTGTTCAAGATGTTGCTTGAAGAAGCTGAGTCCAAATATGGTTACAACAATCAAGGACCGCTTGTCCTCCCATGCCTAATGACAGAGAGTTGGGAGTAG 300 0.4833 MVVGALMTKSKSCPNYLMTDTKQLHGPDEGKSRRNNSGQLAPQVCFSVYVGPQRQRFVIKTRYANHPLFKMLLEEAESKYGYNNQGPLVLPCLMTESWE* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00212 99 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 32 93 IPR003676 GO:0009733
Pte4g00212 99 MobiDBLite consensus disorder prediction 17 38 - -
Pte4g00212 99 Pfam Auxin responsive protein 32 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00212 Pte-Chr4 5196469 5196768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00212 41 92 Calmodulin-binding Proteins AT3G43120 48.077 1.08e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00212 K14488 - fve:101294039 111.694