Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00208 ATGGGAGATGGTGAACTCCTAGTTGATTGTTATGCCAAGGGTGCATTGCTCCTAGAGGCTAATACTGAATTGAAACTGACCGATTATGGTGACTTTATACCATCCAAATTAGTGAAAGATCTTGTTCCAGTTGTTGATTACAGCACACCTATTGAAACTTGGCCGTTGCTTTTGGTGCAACTCACTCGTTTCAGCTGTGCAGGCATTTGTCCGAAATTTCCAGTTCCACGAATGGATCATGATGAATTCAGTGCTCCTCCACTTTTATTAGGTCGCTCTGACACAGTGGAAGAGAAGAAATATGAGACTATATCTATGTTACTCCATTTGACAAAGACACAGGTCGAAATGCTTAAGAAGAAAGCCAATGAAGTTTTTGGTCAAAGGGAATGTGCAGATCATCATAAACTTCGACCTTACAGTAGTTTTGAAGCAATAGCCAGCCACATATGGAGGTCAGCATGTAAAGCTCGTCAAGTTGGCGTTGATCCTAACTAG 498 0.4157 MGDGELLVDCYAKGALLLEANTELKLTDYGDFIPSKLVKDLVPVVDYSTPIETWPLLLVQLTRFSCAGICPKFPVPRMDHDEFSAPPLLLGRSDTVEEKKYETISMLLHLTKTQVEMLKKKANEVFGQRECADHHKLRPYSSFEAIASHIWRSACKARQVGVDPN* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00208 165 Pfam Transferase family 76 159 - -
Pte4g00208 165 Pfam Transferase family 3 69 - -
Pte4g00208 165 Gene3D - 90 165 IPR023213 -
Pte4g00208 165 Gene3D - 1 73 IPR023213 -
Pte4g00208 165 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 81 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00208 Pte-Chr4 5110080 5110711 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00208 3 163 Monolignol Biosynthesis Gene Families AT5G48930 27.805 1.54e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00208 K13065 - jre:108988418 151.369