Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00187 ATGACTAATCAAAATGTGGTGGTTCCTGACGTGAAGTCACGTATTGGCATGGCTATTGCGGCTGTTTTTTGGAACTCATCTTTGTTATCTGGTCCTGCTGTGCCAGAATCATTGGCTACTTTAGGCGGCTTCTTGGGCTTATCACAAAAGCAGCTCATCAAGAGGCTTGAATACGGAGGAGGTAGAGGTTCGGGGGGTAAAGTTTGTGCGTGGATTGATTCCATGAGAGCTTCCTCTCCAACCCGAAACAAATCCACCCCTGAAACTAATGACAATAGCTCTTGGAATTTTCATCATCCTTCAGCTTTGAGTAAGTTTGATGAGTGGACAAAAGAGATGAAAGGGAAGCAGATTCTAATGTTCTTGGACTATGATGGAACCCTGTCTCCAATAGTCTCTGACCCCGATAGAGCATTCATGACCAAGAAGATGAGAGCAGCGTTGAAGGACATAGCAAAGCATTTCCCCACAGCCATAGTGAGTGGGAGGTCCATGGACAAGGTCTACAACTTTGTTAAACTGGCAGAGCTCTACTATGCCGGTAGCCATGGAATGGATATCCAAGGACCAACCAAGAGCCAGAATCACAATCAAGGTAATCAAAGACTGCTCTTCCAACCGGCCGGTGAATTTTTGACTATGATGCGAGAGGTTTATGAAGTCTTGTTGGAGAAGACAAAGTCTGTTCCTGGAGCTTTAGTGGAGAATAACAAGTTTTGCTTGTCCGTGCACTTCCGATGTGTCGATGAAAAGAGTTGGGCTGCATTGGGGGAGCTAATTAGATCAGTACTCAACCAGTACCCTAAACTTAGGTTGACCCATGGGAGAAAGGTACTTGAGATTCGTCCATCCATCAAATGGGACAAGGGGAAAGCCCTCGAATTCCTGTTGGAATCACTTGGATATGCAAATTCTAAGGATGCGTTTCCAATCTACATTGGCGATGATCAAACTGATGAGGACGCATTTAAGGTTGAGCAGCTTTTGCGTCGTTTGGTGGAGTGGAAACAAATTATTTGA 1020 0.45 MTNQNVVVPDVKSRIGMAIAAVFWNSSLLSGPAVPESLATLGGFLGLSQKQLIKRLEYGGGRGSGGKVCAWIDSMRASSPTRNKSTPETNDNSSWNFHHPSALSKFDEWTKEMKGKQILMFLDYDGTLSPIVSDPDRAFMTKKMRAALKDIAKHFPTAIVSGRSMDKVYNFVKLAELYYAGSHGMDIQGPTKSQNHNQGNQRLLFQPAGEFLTMMREVYEVLLEKTKSVPGALVENNKFCLSVHFRCVDEKSWAALGELIRSVLNQYPKLRLTHGRKVLEIRPSIKWDKGKALEFLLESLGYANSKDAFPIYIGDDQTDEDAFKVEQLLRRLVEWKQII* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00187 339 Gene3D - 120 326 IPR023214 -
Pte4g00187 339 FunFam Trehalose 6-phosphate phosphatase 208 284 - -
Pte4g00187 339 FunFam Trehalose 6-phosphate phosphatase 118 204 - -
Pte4g00187 339 CDD HAD_TPP 119 325 - -
Pte4g00187 339 SUPERFAMILY HAD-like 119 325 IPR036412 -
Pte4g00187 339 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 60 325 IPR044651 GO:0004805|GO:0005992
Pte4g00187 339 Pfam Trehalose-phosphatase 121 325 IPR003337 GO:0003824|GO:0005992
Pte4g00187 339 NCBIfam HAD-IIB family hydrolase 119 325 IPR006379 -
Pte4g00187 339 Coils Coil 325 339 - -
Pte4g00187 339 Gene3D - 200 284 - -
Pte4g00187 339 NCBIfam trehalose-phosphatase 115 325 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00187 Pte-Chr4 4227198 4229446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00187 114 324 Trehalose Biosynthesis Gene Families AT1G70290 26.818 6.31e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00187 K01087 - qsa:O6P43_015290 493.812