Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00183 ATGTCAATGGTTTCTATGCATTTTCTGCATGAAGTTCGAGAAGGGTTTTCTTTATCTTTTCAAGAGAGAAAAAGAACAGAGCATTCAACCACCAAAACATGTTACAGGATGCTGTCTAATTCAATGAATTATGAGGTAGAGGAAGAGATAGATCATACGAAAATGATGGACTCTAAAAGGAGCCTATGCTCTATTGACCCAAGCAGTTTCTCGTTAATTGCATCTAAAAGACATAAGCCTGATTCACCTATATCCACTAAGGAGAGGAAGGAGAAGATTGGTGAACGCATTGTTGCTTTGCAGCAGCTGGTTTCACCGTATGGGAAGACGGACACGGCTTCTGTCCTATTGGAGGCAATGGAATATATAAGGTTCCTTCAAGAACAAGTTAAGGTATTAAGTGCTCCTTATCTACAAAGTTTATCCACAGTCAGGATGCAGGAATTGGAGCTTTACCATTGCAGCCTAAGAAATCGAGGCTTATGTCTGGTGCCTATCGAATGTACGGCTGGAGTTGCTGCTGGCAGCAATGGTGCAGATATCTGGGCCCCTATCAAGACCTTTTCCCCCAATTTTGAGAAGCCTATGTCAGAGTTTAATTGA 603 0.4179 MSMVSMHFLHEVREGFSLSFQERKRTEHSTTKTCYRMLSNSMNYEVEEEIDHTKMMDSKRSLCSIDPSSFSLIASKRHKPDSPISTKERKEKIGERIVALQQLVSPYGKTDTASVLLEAMEYIRFLQEQVKVLSAPYLQSLSTVRMQELELYHCSLRNRGLCLVPIECTAGVAAGSNGADIWAPIKTFSPNFEKPMSEFN* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00183 200 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 69 171 - -
Pte4g00183 200 FunFam Transcription factor bHLH113 family 76 152 - -
Pte4g00183 200 CDD bHLH_AtbHLH_like 83 134 IPR045239 -
Pte4g00183 200 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 126 IPR011598 GO:0046983
Pte4g00183 200 Gene3D - 74 149 IPR036638 GO:0046983
Pte4g00183 200 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 84 139 IPR036638 GO:0046983
Pte4g00183 200 SMART finulus 83 132 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00183 Pte-Chr4 4177488 4180726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00183 55 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 57.764 2.14e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00183 - - qsa:O6P43_000031 220.32