Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00177 ATGTGTGGGATTTTTGCGTATCTGAATTACAATGTGAACAGAGAGAGAAGATATATTCTGCAAGTACTCTTTAATGGGCTTAGGAGATTGGAGTATAGAGGCTATGATTCGGCTGGAATAGCCATCGACTCTTCTTCTTTGGTTTCTGATCCAGACTGCTCTGAATCTTCCTCCAAATCCAAGTCTACATGTAACTGCCCAGCGCCTTTGGTGTTTCGTCAAGAGGGCAACATCGAGTCCCTCGTTAAATCCGTTTACCAAGAGGTTTCTGAAATTGATCTGAATTTGGAGGAATCCTTCTCAACGCATGCTGGAATAGCTCACACTCGATGGGCTACACATGGAGAGCCTGCTCCAAGGAACAGCCATCCCCAGTCTTCTGGTCCTGAAAATGACTTTTTGGTCGTCCACAATGGTGTCGTTACTAATTTCAAGGTTTTGAAGGAAACACTGGTGCGACATGGGTTCACTTTTGAATCAGACACTGACACAGAAGTTATTCCTAAACTTGCAAAGTTTGTTTTTGATAAAGCAAATGAAGAAGGTGATCAGACTGTTACATTTAGTCAAGTTGTTCTAGAAGTAATGCGGCACCTTGATGGTGCCTATGCCCTTATTTTCAAAAGCCGTCACTATCCAAATGAGTTGATTGCTTGCAAACGTGGTAGTCCACTTCTCCTGGGTGTTAAAGAATTGACTGAGAATAACTGCCATGGATCAGCATTTGATGATAAATTCCTGTCAAAGAATGGATATCCTAAAGAGCTGTTCTTGTCTAGCGATGCCAATGCTGTGGTTGAACACACAAAGAAGGTGTTGGTGATTGAGGATGGAGAAGTAGTCCACATTAAGGATGGTGCAGTTTCAATCTTAAAGTTTGAAAATAAGAAAGGAAAACATGGTGGTTCTTTTTCTAGGCCTGCATCTGTGCAGCGTGCATTGTCTGTCCTTGAGATGGAAGTTGAACAAATTAACAAAGGCCGCTTTGACCACTACATGCAAAAAGAAATTTATGAACAGCCTGACTCTCTGATGACTACCATGAGAGGGCGGCTTATACGTGGCGGATCCAACAAATCCAAGACTGTCCTCTTGGGTGGATTGAAGGATCACTTGAAAACAATAAGACGAAGTAGGCGGATAGTTTGTATTGGCTGTGGCACAAGTTATAATGCTGCTTTAGCTGCTAGACCAATCTTGGAAGAATTGTCTGGTATCCCTGTTACTATGGAAATTGCTAGTGATATATTGGATCGTCAAGGGCCAATATACAGGGAAGATACAGCAGTATTTGTCAGTCAATCTGGCGAGACTGCTGATACTTTACAAGCATTACAATATGCTCACGAAAACGGGGCATTGTGCGTTGGCATTACAAATACAGTTAGTAGTGCGATAGCAAGGACCACACATTGCGGTGTCCACATAAATGCTGGTGCTGAGATTGGTGTTGCTAGTACCAAGGCATACACAAGTCAAATAGTGGTGATGGCCATGCTAGCACTAGCTATAGGTGGTGACACAATTTCTAATCAAGCAAGAAGGGAGGCAATTGTAGATTGTCTATTCGACTTGCCAAACAAAGTCAGGGAGGTTTTGAAACTTGACCAAGAAATCAAGGATCTTGCAAAATGGTTGATTGCTGAGCAGTCACTTCTTGTTTTTGGTAGAGGATATAACTATGCAACTGCTTTGGAGGGTGCTCTGAAAGTGAAAGAAGTGGCACTTATGCACAGCGAAGGAATACTTGCCGGTGAAATGAAGCATGGCCCCTTAGCTCTGGTAGATGAAAATCTACCAATTCTTGTCATTGCCACCCGTGATGGTTGCTTCAGCAAGCAGCAATCAGTGATTCAGCAACTTCATGCTCGCAAAGGTCGGCTTATTGTAATGTGTTCAAGAGGAGATGCTGCATGTGTGCGCCCTGGGGACTCCTGTAGGGTTATTGAAGTTCCACATGTTGAGGACTGTCTTCAACCAGTAATCAATATCATACCTCTGCAGGTACCCGTGCTCACCATCTTTTGTACTTAA 2034 0.4312 MCGIFAYLNYNVNRERRYILQVLFNGLRRLEYRGYDSAGIAIDSSSLVSDPDCSESSSKSKSTCNCPAPLVFRQEGNIESLVKSVYQEVSEIDLNLEESFSTHAGIAHTRWATHGEPAPRNSHPQSSGPENDFLVVHNGVVTNFKVLKETLVRHGFTFESDTDTEVIPKLAKFVFDKANEEGDQTVTFSQVVLEVMRHLDGAYALIFKSRHYPNELIACKRGSPLLLGVKELTENNCHGSAFDDKFLSKNGYPKELFLSSDANAVVEHTKKVLVIEDGEVVHIKDGAVSILKFENKKGKHGGSFSRPASVQRALSVLEMEVEQINKGRFDHYMQKEIYEQPDSLMTTMRGRLIRGGSNKSKTVLLGGLKDHLKTIRRSRRIVCIGCGTSYNAALAARPILEELSGIPVTMEIASDILDRQGPIYREDTAVFVSQSGETADTLQALQYAHENGALCVGITNTVSSAIARTTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISNQARREAIVDCLFDLPNKVREVLKLDQEIKDLAKWLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDGCFSKQQSVIQQLHARKGRLIVMCSRGDAACVRPGDSCRVIEVPHVEDCLQPVINIIPLQVPVLTIFCT* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00177 677 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 2 306 - -
Pte4g00177 677 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 292 IPR029055 -
Pte4g00177 677 Pfam Glutamine amidotransferase domain 100 218 - -
Pte4g00177 677 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 327 549 - -
Pte4g00177 677 CDD SIS_GlmS_GlmD_2 537 669 IPR035490 -
Pte4g00177 677 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 303 IPR029055 -
Pte4g00177 677 CDD GFAT 2 283 IPR047084 -
Pte4g00177 677 Gene3D - 327 530 - -
Pte4g00177 677 ProSiteProfiles SIS domain profile. 542 677 IPR001347 GO:0097367|GO:1901135
Pte4g00177 677 Gene3D - 531 669 - -
Pte4g00177 677 Pfam SIS domain 548 672 IPR001347 GO:0097367|GO:1901135
Pte4g00177 677 Pfam SIS domain 375 502 IPR001347 GO:0097367|GO:1901135
Pte4g00177 677 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 286 IPR017932 -
Pte4g00177 677 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 669 - -
Pte4g00177 677 ProSiteProfiles SIS domain profile. 371 510 IPR001347 GO:0097367|GO:1901135
Pte4g00177 677 SUPERFAMILY SIS domain 326 670 IPR046348 GO:0097367|GO:1901135
Pte4g00177 677 CDD SIS_GlmS_GlmD_1 380 505 IPR035466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00177 Pte-Chr4 4055088 4061935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00177 81 228 PRT Gene Family AT2G16570 28.947 1.97e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00177 K00820 - jre:109001291 1143.26