Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00172 ATGGCAAAAGACATGAAAATTGGTGAAATTGTTGCTTTGAAGAAAATAAGAATGGATAATGAAAGAGAGGGAAAAAAAGAAAAAAGAAAAACTCCCATGAAAATACTAGCAAAACTAGACCATAAAAATATAATCAAGTTGAAAGAGATTGCTACCTCTTTAGGTGGTAACAAATATTGTGGTGGCATCTATATGGTATTTGAATACGTGGACCATGATTTGAGTGGTCCCACTGATCGCCCTGGAATAAGATTTACAGTTCCCCAAATTAAGGTATTATCAATAAAGTATGCACTAGCTGTGGGTATGCGGTCTGTTGGTTGTATCTTTGCTGAGCTACTGCATGGAAAGCCAATTTTCCTTGGAAAAGATGAGCCAGATCCATTGAATAAAATTTTTGAGCTCTCTGGTGCTCCAAATGAGACCAACTGGCCTTGCGTCTCCAAAATTCCATGGTACAGTCGATTCAAGCCTACAAGACCTATGAAAAGGCGACTAAGAGAGATGTTTAGACATTTTGACCACCACGCTTTGGAGTTCTTAGAGAAGATGCTGACTCTTGATCCATCTCAGATCAGGAACACATCGTTTCCCTCCCTTGAAGGTGCACCTTGTCCTCAAGGTGTATATCCACAAGATGTGACATAG 648 0.3951 MAKDMKIGEIVALKKIRMDNEREGKKEKRKTPMKILAKLDHKNIIKLKEIATSLGGNKYCGGIYMVFEYVDHDLSGPTDRPGIRFTVPQIKVLSIKYALAVGMRSVGCIFAELLHGKPIFLGKDEPDPLNKIFELSGAPNETNWPCVSKIPWYSRFKPTRPMKRRLREMFRHFDHHALEFLEKMLTLDPSQIRNTSFPSLEGAPCPQGVYPQDVT* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00172 215 Pfam Protein kinase domain 3 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00172 215 SUPERFAMILY Protein kinase-like (PK-like) 2 191 IPR011009 -
Pte4g00172 215 PANTHER CELL DIVISION PROTEIN KINASE 92 194 - -
Pte4g00172 215 Gene3D Transferase(Phosphotransferase) domain 1 68 196 - -
Pte4g00172 215 SMART serkin_6 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00172 215 Gene3D Phosphorylase Kinase; domain 1 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00172 Pte-Chr4 3965441 3983541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00172 83 191 Core Cell Cycle Gene Families AT5G64960 60.550 2.60e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte4g00172 Pkinase 2.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00172 K08819 - csv:101215918 172.555