Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00165 ATGGGTGATAGTTGTGATGTTCGGAAAATTAGAAACATTTGTATTCTGGCACACGTTGATCATGGTAAGACTACACTAGCTGATCATTTGATAGCTGCTGCTGGTGGTGGCTTAGTCCACCAGAAGCTTGCAGGTCGGCTTAGGTTTATGGATTATCTCGATGAAGAACAAAGGCGTGCAATTACTATGAAGAGCTCTTCGATTGCTCTTCAATATAAGGATTATTCTATTAATCTAATAGATTCACCAGGTCACATGGATTTTTGTAGTGAGGTATCTACGGCTGCGCGATTAAGTGATGGTGCTTTGATTTTAGTTGATGCTGTCGAAGGTGTTCATATCCAAACTCACGCGGTGTTAAGGCAATGTTGGATTGAGAAGCTTTCGCCATGTTTGGTGCTTAATAAGATTGACAGGTTGATTTCTGAGCTGAGGTTGAGTCCTATGGAAGCCTATACTAGGTTGTTGAGGATTGTTCACGAGGTTAATGGTATTGTGAGTGCATACAAGTCTGAGAAGTACTTGTCTGATGTGGATTCTATACTTGCAGGACCATCAGGGGATGTTGGTAGTGACGAGAATATTGAGTTGATTGAGGATGACGAAGAAGATACCTTCCAACCGCAGAAAGGAAATGTGGTGTTTGTATGTGCATTAGATGGGTGGGGTTTTGGAATCCATGAGTTTGCTAAAATTTATGCTTCAAAGTTTCAGGCAAGTGTAGGAGCTCTGCAAAAGGCTTTATGGGGTCCTCGTTATTTCAATCCAAAGACCAAGATGATTGTTGGGAAGAAAGGTGTAGCTGGAAGCAGTAAAGCTAGGCCTATGTTTGTTCAGTTTGTGCTTGAACCACTGTGGCAGGTATATCTTGGAGCTTTGGATGCTGATGGAGATAGAAGTATGATTGAAAAAGTCATTAAGCAATTTAATTTGGCTATCCCTCCTCGGGAGCTTCAGAACAAGGATCCAAAAATGGTGCTTCAAGCTGTGATGAGCCGTTGGCTTCCATTGTCAGAGACAATCTTATCAATGGTGGTTAAGTGTATGCCAGATCCAATAGCTGCACAATCACATCGAATATCTCGACTTCTGCCTAAGAGGGAGGTTCTAGATCATGGCATTGATCAGAGCGTACTTGCTGAAGCAGAGAATGTTAGGAAATCAGTAGAGGCATGTGATTTGAGTGCTGAAGCCCCATGTGTCGCTTTTGTTTCGAAGATGTTTGCTGTTCCTATAAAAATGCTTCCTCAAAGGGGATTGCATGGAGAAATTATAAACAATGCCACTGATGAAGGAGAAGGTGAATCAGAGGAGTGCTTCCTTGCATTTGCAAGGATTTTTAGTGGTGTTTTATATTCAGGCCAAAGGGTTTTTGTGCTTTCTGCTCTATATGATCCATTAAATGAAGGGGAATCCATGCACAAGCATTTGCAGGAGGCTGAATTGCAGTCTTTATACTTGATGATGGGTCAAGGCTTGAAACTAGTGGCATCAGCCAAAGCAGGGAATGTAATTGCAATCCGCGGTCTAGGCCAGCATATTCTTAAAAGTGCCACACTTTCGTCTACTAGGAACTGCTGGCCTTTCTCCAGTATGGCATTTCAAGTATCTCCAACTCTGAGAGTTGCAATTGAGCCATCTGATCCAGCAGATTTGGGTGTTTTTCTGAAAGGTTTAAGGCTTTTAAATCGGGCCGACCCTTTTGTTGAAGTCACAGTTTCTGGTAGAGGAGAGCATGTCCTTGCTGCAGCAGGAGAAGTTCATCTTGATCGATGCATAAAGGATCTGAAGGAGAGATTTGCAAAGGTGAACTTGGAAGTTTCTCCGCCTTTGGTGTCCTATAAAGAAACCATTGAGGGAGAAGTCTCCAATACACTAGATATATTGAAATCTTTTAGTAAAAGCTCAGATTATGTTGAAAAAACAACTCTTAATGGAAGATGTCTTATTCGGGTACATGTTATGAAGCTTCCTGTTGCTCTTACAAAGTTGCTTGATGAAAATGCTAATTTACTTGGAGATATAATCGGAGTGAAGTCAGGACCAAACAAGAGTTTGAAAATCCAGGCACCAGGTGTGGCCGAAAATGAAAATCCTGTTGAAGTGCTACGTAAACGAATAATAGATGCAGTGGAGAGTGATGTTTCGAGCACAAGTGAAAATGATAAAGATCATGGTCACAGATGTAAGGCAAAATGGCTGAAGCTTCTGAAGAGAATCTGGGCACTTGGACCAAGGTATATAGGTCCAAACATTCTCTTTACTCCGGACTCTAAAGCACAGAGCTCTGATGGCTCTGTTTTAGTACGCGGGTCGTGTCATGTCTCGGAGAAGTTAGGCTTTGTCAATGATTGTAATACCACTGAAAGAGTTTCCGAAACATACTCTGATGTAAGTGAGGGATTATGCATGGAAGCTGAGAGACTTGAGAGTAGTATTGTCTCTGGGTTTCAATTAGCAACAGCTGCTGGTCCCCTATGTGATGAACCAATGTGGGGTTTGGCATTTGTTGTTGAGGCACATATCTGTCCATTAGCTGGGCAGTCTGATGAAGCGGAATCAATCCAACAACCTGAGCAGTACAATGATGGGCAGGTTATGGCGGCTGTGAAAGACGCTTGTAGAGCAGCTGTGCTTCAGAAGAATCCCCGCCTCGTGGAAGGAATGTATTTCTGTGAATTAAACACTCCCACTGAACATTTGGGTTCTATGTATGCCGTTCTTGCTAGAAGGAGGGCTCACATTTTGAAGGAAGAGATGCAGGAAAGCTCACCTCTTTTTACTGTGCATGCCTATTTGCCTGTTGCTGAAAGCTTTGGTTTTGCTGATGAGCTCAGGAGATGGACTTCTGGTGCCGCCAGTGCCCTACTTGTCCTTAGTCATTGGGAAGAACTCTCTGAGGATCCTTTTTTTGTACCAAAGACAGAAGAAGAACTCGAGGAATTCGGAGATGGTTCGAGTGTACTTCCTAACACGGCAAGAAAGCTCATTGATGCTGTGAGACGTCGTAAAGGCCTATCTGTGGAGGAAAAGGTAGTTCAGCATGGGACGAAGCAGAGGACACTTGCACGTAAAGTTTGA 3081 0.4301 MGDSCDVRKIRNICILAHVDHGKTTLADHLIAAAGGGLVHQKLAGRLRFMDYLDEEQRRAITMKSSSIALQYKDYSINLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVHIQTHAVLRQCWIEKLSPCLVLNKIDRLISELRLSPMEAYTRLLRIVHEVNGIVSAYKSEKYLSDVDSILAGPSGDVGSDENIELIEDDEEDTFQPQKGNVVFVCALDGWGFGIHEFAKIYASKFQASVGALQKALWGPRYFNPKTKMIVGKKGVAGSSKARPMFVQFVLEPLWQVYLGALDADGDRSMIEKVIKQFNLAIPPRELQNKDPKMVLQAVMSRWLPLSETILSMVVKCMPDPIAAQSHRISRLLPKREVLDHGIDQSVLAEAENVRKSVEACDLSAEAPCVAFVSKMFAVPIKMLPQRGLHGEIINNATDEGEGESEECFLAFARIFSGVLYSGQRVFVLSALYDPLNEGESMHKHLQEAELQSLYLMMGQGLKLVASAKAGNVIAIRGLGQHILKSATLSSTRNCWPFSSMAFQVSPTLRVAIEPSDPADLGVFLKGLRLLNRADPFVEVTVSGRGEHVLAAAGEVHLDRCIKDLKERFAKVNLEVSPPLVSYKETIEGEVSNTLDILKSFSKSSDYVEKTTLNGRCLIRVHVMKLPVALTKLLDENANLLGDIIGVKSGPNKSLKIQAPGVAENENPVEVLRKRIIDAVESDVSSTSENDKDHGHRCKAKWLKLLKRIWALGPRYIGPNILFTPDSKAQSSDGSVLVRGSCHVSEKLGFVNDCNTTERVSETYSDVSEGLCMEAERLESSIVSGFQLATAAGPLCDEPMWGLAFVVEAHICPLAGQSDEAESIQQPEQYNDGQVMAAVKDACRAAVLQKNPRLVEGMYFCELNTPTEHLGSMYAVLARRRAHILKEEMQESSPLFTVHAYLPVAESFGFADELRRWTSGAASALLVLSHWEELSEDPFFVPKTEEELEEFGDGSSVLPNTARKLIDAVRRRKGLSVEEKVVQHGTKQRTLARKV* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00165 1026 CDD EF2 11 234 - -
Pte4g00165 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 350 IPR027417 -
Pte4g00165 1026 Pfam Elongation factor G C-terminus 885 969 IPR000640 -
Pte4g00165 1026 CDD aeEF2_snRNP_like_IV 609 891 - -
Pte4g00165 1026 PRINTS GTP-binding elongation factor signature 94 105 IPR000795 GO:0003924|GO:0005525
Pte4g00165 1026 PRINTS GTP-binding elongation factor signature 58 66 IPR000795 GO:0003924|GO:0005525
Pte4g00165 1026 PRINTS GTP-binding elongation factor signature 12 25 IPR000795 GO:0003924|GO:0005525
Pte4g00165 1026 PRINTS GTP-binding elongation factor signature 78 88 IPR000795 GO:0003924|GO:0005525
Pte4g00165 1026 PRINTS GTP-binding elongation factor signature 130 139 IPR000795 GO:0003924|GO:0005525
Pte4g00165 1026 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 8 241 IPR000795 GO:0003924|GO:0005525
Pte4g00165 1026 Gene3D - 883 1017 - -
Pte4g00165 1026 FunFam Translation elongation factor 2 537 613 - -
Pte4g00165 1026 FunFam Elongation factor like GTPase 1 883 1018 - -
Pte4g00165 1026 Pfam Elongation factor Tu domain 2 441 520 IPR004161 GO:0005525
Pte4g00165 1026 FunFam Elongation factor 2-like protein 2 214 - -
Pte4g00165 1026 Pfam Elongation factor Tu GTP binding domain 9 349 IPR000795 GO:0003924|GO:0005525
Pte4g00165 1026 Gene3D - 633 881 IPR014721 -
Pte4g00165 1026 SUPERFAMILY Ribosomal protein S5 domain 2-like 612 886 IPR020568 -
Pte4g00165 1026 Gene3D Yeast translation eEF2 (G' domain) 226 335 - -
Pte4g00165 1026 SUPERFAMILY Translation proteins 390 532 IPR009000 -
Pte4g00165 1026 Gene3D Elongation Factor G (Translational Gtpase), domain 3 537 613 - -
Pte4g00165 1026 FunFam Elongation factor like GTPase 1 226 335 - -
Pte4g00165 1026 CDD EF2_snRNP_III 538 609 - -
Pte4g00165 1026 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 8 1025 - -
Pte4g00165 1026 SUPERFAMILY EF-G C-terminal domain-like 887 985 IPR035647 -
Pte4g00165 1026 SUPERFAMILY EF-G C-terminal domain-like 535 610 IPR035647 -
Pte4g00165 1026 CDD eEF2_snRNP_like_C 887 965 - -
Pte4g00165 1026 CDD EF2_II 399 523 - -
Pte4g00165 1026 NCBIfam small GTP-binding protein domain 9 139 IPR005225 GO:0005525
Pte4g00165 1026 Gene3D - 4 204 IPR027417 -
Pte4g00165 1026 Gene3D Translation factors 352 535 - -
Pte4g00165 1026 FunFam Elongation factor Tu family protein 352 535 - -
Pte4g00165 1026 SMART EFG_C_a 884 973 IPR000640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00165 Pte-Chr4 3556371 3559631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00165 3 1027 Eukaryotic Initiation Factors Gene Family AT3G22980 73.934 0.0 1527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00165 K14536 - zju:107410537 1610.51