Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00157 ATGGATATCAGTGGAGGAGAGAACATGGTGTTCACTGTGGAGTCACAGAAGTCAGCTCCTGCACCCTTCCTGACAAAGACATATCAGTTGGTCGATGACCCTCGCACTGATCACATTGTTTCTTGGGGAGAAGATGATGCCACCTTTGTGGTGTGGCGGCCTCCTGAGTTTGCCAGAGATCTACTGCCTAACTATTTCAAGCATAACAACTTCTCCAGCTTTGTTAGGCAACTCAACACCTACGGTTTCAAGAAGATAGTGTCTGACAGGTGGGAGTTTGCAAACGAGCACTTTAGAAAAGGAGCTAAACATCTTCTCTGCGAAATCCACAGAAGAAAAGGCGCACAGCAGTACCAACCCCAGAACTACCATGACAATCAATATCAACCATCACAATTTCTTCAACCAGATGATCAAAACCTGTTTTGGATAGACTCTCCAATACCATCATCTCCAAAATCAAACACCGATATTCTTACTGCATTATCTGAAGACAACCAAAGACTGCGGAGAAAAAACTTAATGCTCCTCTCAGAACTCACACACATGAAGAGTCTGTACAATAACATCATCTACTTCATCCAAAACCATGTACAACCTATCGAAAAACGAAGTGGCAATGCTGTCTCAAAGCTCATTTTGCTGGATTCAGATCAAACTGTTGGAGAAGGTCAAGCTGCCAAAGATCACTCTATAAATTCAGCTGAGGAGTCAAACACTAGTACTCTCAAGCTATTTGGAGTTCCACTCAGCGGGACAAAAAGATCTCACTCAGGAAGATGGCAGGATCTCATTTGA 798 0.4336 MDISGGENMVFTVESQKSAPAPFLTKTYQLVDDPRTDHIVSWGEDDATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKIVSDRWEFANEHFRKGAKHLLCEIHRRKGAQQYQPQNYHDNQYQPSQFLQPDDQNLFWIDSPIPSSPKSNTDILTALSEDNQRLRRKNLMLLSELTHMKSLYNNIIYFIQNHVQPIEKRSGNAVSKLILLDSDQTVGEGQAAKDHSINSAEESNTSTLKLFGVPLSGTKRSHSGRWQDLI* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00157 265 Gene3D - 15 113 IPR036388 -
Pte4g00157 265 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 216 IPR027725 -
Pte4g00157 265 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte4g00157 265 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte4g00157 265 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte4g00157 265 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte4g00157 265 FunFam Heat stress transcription factor B-4 15 113 - -
Pte4g00157 265 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte4g00157 265 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte4g00157 265 SUPERFAMILY "Winged helix" DNA-binding domain 19 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00157 Pte-Chr4 3429520 3431259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00157 7 257 HSF AT1G46264 49.175 2.47e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte4g00157 HSF_DNA-bind 2.5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00157 K09419 - qsa:O6P43_014695 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00157 4 3429520 3431259 Pte4g00157 4 3429520 3431259 RCT