Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00152 ATGGACCAAGCAATTCTTGATGATATAATCAATCGACTACTTGAAGTCCGAGGCAGACCTGGAAAGCAAGTCCAGTTATCTGAGTCGGAGATCCGCCAACTTTGCTTAGCTTCTAAAGATATCTTCTTGCAGCAACCTAATTTGTTAGAGCTTGAAGCACCCATTAAGATTTGCGGTGACATACATGGTCAGTATTCTGATCTTTTGAGGCTTTTTGAGTATGGTGGTTTTCCTCCTAAGGCCAATTATCTTTTTCTGGGTGATTACGTCGATCGAGGAAAACAGAGCTTGGAAACAATTTGTCTTCTTCTGGCATACAAAATTAAATATCCTGAGAACTTCTTTCTTCTGAGAGGGAACCATGAATGTGCTTCTATAAACCGTATATATGGTTTCTATGATGAGTGTAAGAGAAGGTTCAATGTAAGGTTGTGGAAAGTATTCACAGATTGCTTCAACTGCTTACCAGTTGCAGCCCTAATTGATGAAAAGATCCTGTGTATGCATGGCGGTCTTTCTCCAGACTTACAAAATTTGGATCAGATCAGAAATTTGCAGCGGCCCATAGATGTACCTGATACGGGTTTGCTTTGTGATCTTCTTTGGTCTGATCCAAGCAAAGATGTGCCAGGTTGGGGAATGAATGATAGGGGAGTTTCCTATACATTTGGTGCTGATAAAGTCTCCGAGTTTCTTCAGAAGCATGATTTGGATCTCATCTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAATTCTTTGCAAACAGGCAGCTTGTAACAATATTTTCTGCGCCTAATTATTGTGGGGAGTTCGATAATGCTGGTGCTATGATGAGTGTTGATGAGACATTAATGTGCTCCTTCCAGATCTTGAAGGCAGCAGACAAAAAGCATAAATTCAATTTTGGAAGCTCAACCACAGCTCTACCTGGAAATTCATTTACAGGGCTTCTTGGGAGTACAACAACAACTAAACCTGGGAACTCTCCTGCAGGTCTTCGCTAG 1008 0.4147 MDQAILDDIINRLLEVRGRPGKQVQLSESEIRQLCLASKDIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLQNLDQIRNLQRPIDVPDTGLLCDLLWSDPSKDVPGWGMNDRGVSYTFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKAADKKHKFNFGSSTTALPGNSFTGLLGSTTTTKPGNSPAGLR* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00152 335 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Pte4g00152 335 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Pte4g00152 335 FunFam Serine/threonine-protein phosphatase 1 303 - -
Pte4g00152 335 SMART pp2a_7 26 296 IPR006186 GO:0016787
Pte4g00152 335 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Pte4g00152 335 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Pte4g00152 335 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Pte4g00152 335 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Pte4g00152 335 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Pte4g00152 335 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Pte4g00152 335 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Pte4g00152 335 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 300 - -
Pte4g00152 335 Gene3D - 1 305 IPR029052 -
Pte4g00152 335 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Pte4g00152 335 CDD MPP_PP1_PPKL 6 293 - -
Pte4g00152 335 SUPERFAMILY Metallo-dependent phosphatases 17 299 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00152 Pte-Chr4 3394508 3397310 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00152 33 239 Calmodulin-binding Proteins AT5G63870 32.661 4.67e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00152 K06269 - tcc:18600080 633.254